Click here to switch to the map view.

The map label for this gene is yceI [C]

Identifier: 50085167

GI number: 50085167

Start: 2023161

End: 2023742

Strand: Reverse

Name: yceI [C]

Synonym: ACIAD2034

Alternate gene names: 50085167

Gene position: 2023742-2023161 (Counterclockwise)

Preceding gene: 50085168

Following gene: 50085165

Centisome position: 56.24

GC content: 38.66

Gene sequence:

>582_bases
ATGAATCTTAAAACATTATCTCTCGGTTTAGCAGTTGCAGTCTCAAGCTCTTTTGCATTGGCTGCGCCAGTAGATTATAA
AATTGATCCAACTCACACAGCGACTGTATTTTCTTGGAACCACTTCGGTTTTTCTACCCCAAGTGCAAACTTTAGTGATA
TTCAGGGTGTAATTAAGGTAGACAACGCGAAACCTTCAAACTCATCTGTTGAAGTTACCATTCCTGTAAGCAGTGTAAAT
ACTAACGTGACTGCTTTGGACAAAGAATTCCAGCAAGAAGCATGGTTCAATGCGGCTAAATATCCAAACATTACATTCAA
AAGTACGAAAGTTGAAACCAAAGATAAAAAGCATTTCAAAATTACAGGTAACTTGACTGTAAAAGGTATTACTAAACCAG
TGGTACTGAATGCTGTTTTGAACAAACAAGGCGAGCATCCAATGGCTAAAGTACCAGCGATTGGCTTCAATGCGACCACT
TCATTTAATCGTTCAGAATTTGGTATCGGAAACTATGTACCAAACGTTGGCGACAAGATCACAGTCAACATTACAACAGA
AGCTGAAGCTGCCAAAAAGTAA

Upstream 100 bases:

>100_bases
TGGTTGTTTCATCCATGCAACATATCGTTTTATAAATATGAATGTATTAAATTATTGATTGTATAGACTTATCAATATTA
TTTCACAGGATAACAAGCTC

Downstream 100 bases:

>100_bases
GCATCTAAAAGTGAGTTAAAAAAATGGCTTGGTGTATCGTTACCCAAGCCATTTTTTGTTGCATAAATATTGTGTATTAC
TTTAAGTGAGTATTTATGTT

Product: signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNLKTLSLGLAVAVSSSFALAAPVDYKIDPTHTATVFSWNHFGFSTPSANFSDIQGVIKVDNAKPSNSSVEVTIPVSSVN
TNVTALDKEFQQEAWFNAAKYPNITFKSTKVETKDKKHFKITGNLTVKGITKPVVLNAVLNKQGEHPMAKVPAIGFNATT
SFNRSEFGIGNYVPNVGDKITVNITTEAEAAKK

Sequences:

>Translated_193_residues
MNLKTLSLGLAVAVSSSFALAAPVDYKIDPTHTATVFSWNHFGFSTPSANFSDIQGVIKVDNAKPSNSSVEVTIPVSSVN
TNVTALDKEFQQEAWFNAAKYPNITFKSTKVETKDKKHFKITGNLTVKGITKPVVLNAVLNKQGEHPMAKVPAIGFNATT
SFNRSEFGIGNYVPNVGDKITVNITTEAEAAKK
>Mature_193_residues
MNLKTLSLGLAVAVSSSFALAAPVDYKIDPTHTATVFSWNHFGFSTPSANFSDIQGVIKVDNAKPSNSSVEVTIPVSSVN
TNVTALDKEFQQEAWFNAAKYPNITFKSTKVETKDKKHFKITGNLTVKGITKPVVLNAVLNKQGEHPMAKVPAIGFNATT
SFNRSEFGIGNYVPNVGDKITVNITTEAEAAKK

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=189, Percent_Identity=35.978835978836, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 20792; Mature: 20792

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKTLSLGLAVAVSSSFALAAPVDYKIDPTHTATVFSWNHFGFSTPSANFSDIQGVIKV
CCEEEEEEEEEEEECCCEEEECCCCEEECCCCEEEEEEECCCCCCCCCCCHHHCEEEEEE
DNAKPSNSSVEVTIPVSSVNTNVTALDKEFQQEAWFNAAKYPNITFKSTKVETKDKKHFK
CCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCEEEECCEECCCCCCEEE
ITGNLTVKGITKPVVLNAVLNKQGEHPMAKVPAIGFNATTSFNRSEFGIGNYVPNVGDKI
EECCEEEEECCCCEEEEHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TVNITTEAEAAKK
EEEEEECCCCCCC
>Mature Secondary Structure
MNLKTLSLGLAVAVSSSFALAAPVDYKIDPTHTATVFSWNHFGFSTPSANFSDIQGVIKV
CCEEEEEEEEEEEECCCEEEECCCCEEECCCCEEEEEEECCCCCCCCCCCHHHCEEEEEE
DNAKPSNSSVEVTIPVSSVNTNVTALDKEFQQEAWFNAAKYPNITFKSTKVETKDKKHFK
CCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCEEEECCEECCCCCCEEE
ITGNLTVKGITKPVVLNAVLNKQGEHPMAKVPAIGFNATTSFNRSEFGIGNYVPNVGDKI
EECCEEEEECCCCEEEEHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TVNITTEAEAAKK
EEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA