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The map label for this gene is ygiV [H]

Identifier: 50085147

GI number: 50085147

Start: 2003714

End: 2004565

Strand: Reverse

Name: ygiV [H]

Synonym: ACIAD2012

Alternate gene names: 50085147

Gene position: 2004565-2003714 (Counterclockwise)

Preceding gene: 50085148

Following gene: 50085143

Centisome position: 55.7

GC content: 37.91

Gene sequence:

>852_bases
ATGACGGCTTATGATCTGAAATTAAAGTGCGTGTGTGATTACATTCAACAACATTTGGATGAAACTTTAAGTTTACAACA
ACTGAGTGAAGTTGCTGGATTATCCAGATTTCATTTTCATCGTATTTTTTATGCACATCTGGGCATGAATATAATGAAAT
ATACACAAATGTTGCGATTAAAACGCGCATCATTTCAGCTTGTATTTAAACCAGAAGTAAAAGTGATCGAGATTGCTTTA
GATGCTGGTTTTGATAGTCCAGAAGCATTTGCAAGAGCGTTTAAACGTTCATTTGATCAAACACCCAGTGCCTTTAGAGT
TGAGCCAAACTGGCAAAATTGGCACAGGAAGTTTGTCTATTTCACCCCTGAAAGTGAGCTGAAAATGAACGTGACCATTA
TTGAACGACCTGTTGAGAAGATTGCTTATATTTCTCATCAGGGTTCACCTGAAAAAGTATTTGAAACTGCAGCCAAGTTT
ATCGAATGGCGTAAAAGAACAGGGTTGTCTCCTGTTAAAACCTCGGCAACCTATGGCATTCCTTTTTCGGATCCTGAACA
GACACCTGAAAAAGAATTTCGCTTCGATATTGCAGGATCAATCACTAAGTCGATTGATCAGAATAATGAAGGTATCGAAA
TGAGTGAAATTCCCGCGGGACGCTATGCTATGGTTCGGCATTGGGGAAGTCATGATTATATACGGGATAGCGTGTATTTT
TTATTCAGAAACTGGTTACCAGCGCAACAAGAAGAAGCGGGCGATTATCCAGTATTCTTTCATTATCATAATTTTGTACA
TGAAGTAAAAGAAGCTGATTTGGTCACCGATATTTATTTGCTGCTAAAATAA

Upstream 100 bases:

>100_bases
CAGGATTATTTCAAACAAGTGATTAAATCGCAATTTTGATCAGGATCGGCATGTTTAATCATTTCATAATATGCCGATCA
AATGAACATGTATTAAAGCT

Downstream 100 bases:

>100_bases
ACCGATTTAGAGACGATTAAAATCGTCTCTAAATATTTTAAAAATATAGAATTGAGATTTTCAATCATCTGAAATTAGCT
CGATACAAGCATATTGTTCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTAYDLKLKCVCDYIQQHLDETLSLQQLSEVAGLSRFHFHRIFYAHLGMNIMKYTQMLRLKRASFQLVFKPEVKVIEIAL
DAGFDSPEAFARAFKRSFDQTPSAFRVEPNWQNWHRKFVYFTPESELKMNVTIIERPVEKIAYISHQGSPEKVFETAAKF
IEWRKRTGLSPVKTSATYGIPFSDPEQTPEKEFRFDIAGSITKSIDQNNEGIEMSEIPAGRYAMVRHWGSHDYIRDSVYF
LFRNWLPAQQEEAGDYPVFFHYHNFVHEVKEADLVTDIYLLLK

Sequences:

>Translated_283_residues
MTAYDLKLKCVCDYIQQHLDETLSLQQLSEVAGLSRFHFHRIFYAHLGMNIMKYTQMLRLKRASFQLVFKPEVKVIEIAL
DAGFDSPEAFARAFKRSFDQTPSAFRVEPNWQNWHRKFVYFTPESELKMNVTIIERPVEKIAYISHQGSPEKVFETAAKF
IEWRKRTGLSPVKTSATYGIPFSDPEQTPEKEFRFDIAGSITKSIDQNNEGIEMSEIPAGRYAMVRHWGSHDYIRDSVYF
LFRNWLPAQQEEAGDYPVFFHYHNFVHEVKEADLVTDIYLLLK
>Mature_282_residues
TAYDLKLKCVCDYIQQHLDETLSLQQLSEVAGLSRFHFHRIFYAHLGMNIMKYTQMLRLKRASFQLVFKPEVKVIEIALD
AGFDSPEAFARAFKRSFDQTPSAFRVEPNWQNWHRKFVYFTPESELKMNVTIIERPVEKIAYISHQGSPEKVFETAAKFI
EWRKRTGLSPVKTSATYGIPFSDPEQTPEKEFRFDIAGSITKSIDQNNEGIEMSEIPAGRYAMVRHWGSHDYIRDSVYFL
FRNWLPAQQEEAGDYPVFFHYHNFVHEVKEADLVTDIYLLLK

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=158, Percent_Identity=43.0379746835443, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1790857, Length=275, Percent_Identity=25.0909090909091, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 33183; Mature: 33052

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYDLKLKCVCDYIQQHLDETLSLQQLSEVAGLSRFHFHRIFYAHLGMNIMKYTQMLRL
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KRASFQLVFKPEVKVIEIALDAGFDSPEAFARAFKRSFDQTPSAFRVEPNWQNWHRKFVY
HHCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCHHCCCEEEEE
FTPESELKMNVTIIERPVEKIAYISHQGSPEKVFETAAKFIEWRKRTGLSPVKTSATYGI
ECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
PFSDPEQTPEKEFRFDIAGSITKSIDQNNEGIEMSEIPAGRYAMVRHWGSHDYIRDSVYF
CCCCCCCCCHHHHEEHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCHHHHHHHHH
LFRNWLPAQQEEAGDYPVFFHYHNFVHEVKEADLVTDIYLLLK
HHHHCCCCCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAYDLKLKCVCDYIQQHLDETLSLQQLSEVAGLSRFHFHRIFYAHLGMNIMKYTQMLRL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KRASFQLVFKPEVKVIEIALDAGFDSPEAFARAFKRSFDQTPSAFRVEPNWQNWHRKFVY
HHCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCHHCCCEEEEE
FTPESELKMNVTIIERPVEKIAYISHQGSPEKVFETAAKFIEWRKRTGLSPVKTSATYGI
ECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
PFSDPEQTPEKEFRFDIAGSITKSIDQNNEGIEMSEIPAGRYAMVRHWGSHDYIRDSVYF
CCCCCCCCCHHHHEEHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCHHHHHHHHH
LFRNWLPAQQEEAGDYPVFFHYHNFVHEVKEADLVTDIYLLLK
HHHHCCCCCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]