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The map label for this gene is yybS [H]

Identifier: 49188308

GI number: 49188308

Start: 5213945

End: 5214883

Strand: Reverse

Name: yybS [H]

Synonym: BAS5324

Alternate gene names: 49188308

Gene position: 5214883-5213945 (Counterclockwise)

Preceding gene: 49188309

Following gene: 49188307

Centisome position: 99.74

GC content: 33.33

Gene sequence:

>939_bases
ATGATGAAAAACACAAAATTTATTACTGAAGGTGCAGCGTTGTTAGCGATATATGCAATGCTATTGCTTATATCTATGTA
TGTCCCAATTTTAGGTGCAGTTGTAACGTTTGCATTGCCGTTGCCATTTATATTGCTAACGATAAGATATAAATTATCCA
GTGCCTTTGTAATTTTTACGGCGGCGCTTTTTATTACTGTTATCGTCAGCCAACCGATGAACTTAGTAAAGACAACTATG
TTTGGGTTGATAGGGATCGTTTTAGGGTATATGTATAAAAAACAAAAAAAGCCCGTAGAAATTTTGATGGCAGGGACGCT
TGCTTACTTAATTGGTATTATGCTCATTTATGTTGCAAGTATAAAGTTTTTTAACATAGATTTAATGAAGCAAATGCAAA
ATATGTTTAATGAAAGTATGACGCAAAGTGAAAAGATAGTTACTGCTGCGGGTATGCCGATTAGTAAAGGGCAAAAAGAG
CTATTTGTACAAATGAATGATATATTACAAACGGTATTCCCCAGTATACTTGTGATGGTTTCTGTATGTCTTTCGTGGAT
CACCGTAATAATATCAGGTAGTGCTTTAAGAAAGCTAAAACATGATGTCATACCTTGGCCTAAATTTAAAGATATACAAT
TACCGAAAAGTATTGTTTGGTATTACGTTATATTTATTTTATTATCAACTTTTATAAAAGTAGAACCGACATCATATTTA
CATATGGTATTTTCTAACCTATATGTCATATTTGCTTTATTACTCGTGCTGCAAGGTCTGACATTTATCGCCTTTCTGGC
GCATAGCAAAGGTTTTACGAAAGGGGTTCCTATTATTAGTTTTATTGCCTGCATGTTTATTCCGATGCTGTTTCCTCTTG
TGACAATCTTAGGTATAATTGATTTAGGGATTTCATTACGTTCTAAAATAGGAGGATAA

Upstream 100 bases:

>100_bases
TTTTACCATATGTTGGTGAATAATAGCGTATGAAATGCACAGTAGAGTCGGACTCTACTGTGCATTTTGCTATGCTTTTC
TTTTTTGAAAGAGAGGTTAG

Downstream 100 bases:

>100_bases
AGTAATATTCCTTATACTATTTTAATCTGTTTAACTAACTGGAAGATAAGTTAGTTTTACTTTATAGGAGTTGTATACAT
GCCTGAATTTTATAAGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MMKNTKFITEGAALLAIYAMLLLISMYVPILGAVVTFALPLPFILLTIRYKLSSAFVIFTAALFITVIVSQPMNLVKTTM
FGLIGIVLGYMYKKQKKPVEILMAGTLAYLIGIMLIYVASIKFFNIDLMKQMQNMFNESMTQSEKIVTAAGMPISKGQKE
LFVQMNDILQTVFPSILVMVSVCLSWITVIISGSALRKLKHDVIPWPKFKDIQLPKSIVWYYVIFILLSTFIKVEPTSYL
HMVFSNLYVIFALLLVLQGLTFIAFLAHSKGFTKGVPIISFIACMFIPMLFPLVTILGIIDLGISLRSKIGG

Sequences:

>Translated_312_residues
MMKNTKFITEGAALLAIYAMLLLISMYVPILGAVVTFALPLPFILLTIRYKLSSAFVIFTAALFITVIVSQPMNLVKTTM
FGLIGIVLGYMYKKQKKPVEILMAGTLAYLIGIMLIYVASIKFFNIDLMKQMQNMFNESMTQSEKIVTAAGMPISKGQKE
LFVQMNDILQTVFPSILVMVSVCLSWITVIISGSALRKLKHDVIPWPKFKDIQLPKSIVWYYVIFILLSTFIKVEPTSYL
HMVFSNLYVIFALLLVLQGLTFIAFLAHSKGFTKGVPIISFIACMFIPMLFPLVTILGIIDLGISLRSKIGG
>Mature_312_residues
MMKNTKFITEGAALLAIYAMLLLISMYVPILGAVVTFALPLPFILLTIRYKLSSAFVIFTAALFITVIVSQPMNLVKTTM
FGLIGIVLGYMYKKQKKPVEILMAGTLAYLIGIMLIYVASIKFFNIDLMKQMQNMFNESMTQSEKIVTAAGMPISKGQKE
LFVQMNDILQTVFPSILVMVSVCLSWITVIISGSALRKLKHDVIPWPKFKDIQLPKSIVWYYVIFILLSTFIKVEPTSYL
HMVFSNLYVIFALLLVLQGLTFIAFLAHSKGFTKGVPIISFIACMFIPMLFPLVTILGIIDLGISLRSKIGG

Specific function: Unknown

COG id: COG4241

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018710 [H]

Pfam domain/function: PF09991 DUF2232 [H]

EC number: NA

Molecular weight: Translated: 34884; Mature: 34884

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]