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The map label for this gene is yjbG [H]

Identifier: 49188294

GI number: 49188294

Start: 5197244

End: 5199061

Strand: Direct

Name: yjbG [H]

Synonym: BAS5310

Alternate gene names: 49188294

Gene position: 5197244-5199061 (Clockwise)

Preceding gene: 49188293

Following gene: 49188315

Centisome position: 99.4

GC content: 37.13

Gene sequence:

>1818_bases
ATGAAAGATGTAATTGAGAAACGCCATATTCGCGCAGAAGTTCCTATTGAATTAACATGGGACCTCTCTGATTTATACGA
ATCTGATAAAAAGTGGGAAACTGCATTACGTGTATTAACAGATGATATAAAAAAACTTGATGCGTTTAAAGGACAATTAC
ACACTAGCCCTACCACCTTATTACATTGCCTACTTTTAGAAGAAGAGCTTTTAATGAAGTTAACAAAACTATACTCCTAT
GCAAATTTAAAAGAATCTACTGATCGTACAAATCCAGTTATTCAAGCGAACTCTTCCAAAATTGCTGCTTTATGGACGAA
AGTACATACGGCGCTATCCTTTATTCATAATGAAATTCTCTCATTAGAAGAAGGCACAATTGAAAAATATTTAACTAAAG
AAACAAAACTTGAACCTTTCCGTAAATCATTACTAGACATATTACAAAAAAGGCAGTACACGCTCTCTCCTGAAACAGAA
GAAGCACTTGCTGCACTTGGCGAAGTACATAGTTCTCCATACAAAATTTACGGTATGACTAAATTAGCCGATATGGATTT
TAACTCCATACAAGACGAACAAGGAAATGAACTCCCTGTCTCATTTTCATTATTTGAAAGTAAATATGAGTTTTCTCCAA
GCGTAGACATACGCAGAAAGGCATACTCATCATTTGTGTCCACCTTGAAGCGATATAAAAATACCGTGGCAACAACATAT
GCTACCGAGGTAAAAAAACAAGTAACACTCTCTCGTTTACGCAAATTTGAATCTGTTACTCATATGCTTTTAGAGCCTCA
AAACGTTCCACTTGAAATGTATAACAATCAACTTGATATTATTTATAAAGAATTAGCGCCTCATATGCGCCGTTTTGCAG
ATTTAAAAAAGAAAGTATTAGGACTCGATCAAATGCTGTTCTGCGACTTACATGCACCTTTAGATCCCGAATTTAATCCA
GCAATTACTTACGAGGAAGCTGGAAAACTTATTCAAGACTCTTTACAAGTACTTGGCGATGAATATAGTGCCATTATCAA
AAAAGGGTTCAAAGAAAGATGGGTCGATCTTGCAGATAATGTAGGGAAATCAACAGGAGCATTTTGTTCAAGCCCATATG
GTTCTCATCCATACATTTTAATTACATGGCAAAATACGATGCGTGGCTGCTTCACATTGGCTCATGAATTTGGACATGCT
GGTCATTTTTATTTAGCAAATAAAAACCAGCGTATTATGAATGTACGTCCATCTATGTACTTTGTTGAAGCGCCATCTAC
AATGAATGAATTACTATTAGCCCAGCATTTATTAGCGACGACTGACGATAAGAGAATGCGTAGATGGGTTATTCTGCAAC
TACTCGGCACGTATTATCATAACTTTGTTACCCACTTACTTGAGGGAGAATATCAAAGGAGGGTATATAGCCTAGCAGAA
GAAGGAGAAGCACTTACAGCTACAACTTTAACTGAAATAAAAACAAATGTCCTTTCAACATTCTGGGGAAATTCCGTAGA
AATTGATGAAGGTGCTGGCTTAACTTGGATGCGTCAACCTCATTATTATATGGGCTTATATTCTTACACGTATTCCGCAG
GCCTCACTGCATCTACTGCGGTAGCTCAAATGATTAAAGAAGAAGGACAACCTGCCGTTGATCGCTGGTTAGATGTACTT
CGCGCTGGTGGTACGATGAAACCACTTGAATTAATGAAACATGCCGGAGTCGATATGTCAAAACCAGATGCAATCCGGAA
AGCTGTTTCTTACGTCGGTTCCTTAATTGATGAATTAGAACGCTCTTATGAAGAATAA

Upstream 100 bases:

>100_bases
TGCTTGTCCTTTTTCATATATAGAAATGTAAAATATTTTCATTTTACTGAATTTTCTAGTATCATGTTTTTAGATACTTA
TAATAAGGGGGATATAATAT

Downstream 100 bases:

>100_bases
AAAATAAGCCCTCGCTTTATGAGGGCTTATTTCATATTTACTTTCCAAATCTTTTACGGTATCCACATTTTCTGCATAGC
TCTTCAACTGCAACTCTTCT

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MKDVIEKRHIRAEVPIELTWDLSDLYESDKKWETALRVLTDDIKKLDAFKGQLHTSPTTLLHCLLLEEELLMKLTKLYSY
ANLKESTDRTNPVIQANSSKIAALWTKVHTALSFIHNEILSLEEGTIEKYLTKETKLEPFRKSLLDILQKRQYTLSPETE
EALAALGEVHSSPYKIYGMTKLADMDFNSIQDEQGNELPVSFSLFESKYEFSPSVDIRRKAYSSFVSTLKRYKNTVATTY
ATEVKKQVTLSRLRKFESVTHMLLEPQNVPLEMYNNQLDIIYKELAPHMRRFADLKKKVLGLDQMLFCDLHAPLDPEFNP
AITYEEAGKLIQDSLQVLGDEYSAIIKKGFKERWVDLADNVGKSTGAFCSSPYGSHPYILITWQNTMRGCFTLAHEFGHA
GHFYLANKNQRIMNVRPSMYFVEAPSTMNELLLAQHLLATTDDKRMRRWVILQLLGTYYHNFVTHLLEGEYQRRVYSLAE
EGEALTATTLTEIKTNVLSTFWGNSVEIDEGAGLTWMRQPHYYMGLYSYTYSAGLTASTAVAQMIKEEGQPAVDRWLDVL
RAGGTMKPLELMKHAGVDMSKPDAIRKAVSYVGSLIDELERSYEE

Sequences:

>Translated_605_residues
MKDVIEKRHIRAEVPIELTWDLSDLYESDKKWETALRVLTDDIKKLDAFKGQLHTSPTTLLHCLLLEEELLMKLTKLYSY
ANLKESTDRTNPVIQANSSKIAALWTKVHTALSFIHNEILSLEEGTIEKYLTKETKLEPFRKSLLDILQKRQYTLSPETE
EALAALGEVHSSPYKIYGMTKLADMDFNSIQDEQGNELPVSFSLFESKYEFSPSVDIRRKAYSSFVSTLKRYKNTVATTY
ATEVKKQVTLSRLRKFESVTHMLLEPQNVPLEMYNNQLDIIYKELAPHMRRFADLKKKVLGLDQMLFCDLHAPLDPEFNP
AITYEEAGKLIQDSLQVLGDEYSAIIKKGFKERWVDLADNVGKSTGAFCSSPYGSHPYILITWQNTMRGCFTLAHEFGHA
GHFYLANKNQRIMNVRPSMYFVEAPSTMNELLLAQHLLATTDDKRMRRWVILQLLGTYYHNFVTHLLEGEYQRRVYSLAE
EGEALTATTLTEIKTNVLSTFWGNSVEIDEGAGLTWMRQPHYYMGLYSYTYSAGLTASTAVAQMIKEEGQPAVDRWLDVL
RAGGTMKPLELMKHAGVDMSKPDAIRKAVSYVGSLIDELERSYEE
>Mature_605_residues
MKDVIEKRHIRAEVPIELTWDLSDLYESDKKWETALRVLTDDIKKLDAFKGQLHTSPTTLLHCLLLEEELLMKLTKLYSY
ANLKESTDRTNPVIQANSSKIAALWTKVHTALSFIHNEILSLEEGTIEKYLTKETKLEPFRKSLLDILQKRQYTLSPETE
EALAALGEVHSSPYKIYGMTKLADMDFNSIQDEQGNELPVSFSLFESKYEFSPSVDIRRKAYSSFVSTLKRYKNTVATTY
ATEVKKQVTLSRLRKFESVTHMLLEPQNVPLEMYNNQLDIIYKELAPHMRRFADLKKKVLGLDQMLFCDLHAPLDPEFNP
AITYEEAGKLIQDSLQVLGDEYSAIIKKGFKERWVDLADNVGKSTGAFCSSPYGSHPYILITWQNTMRGCFTLAHEFGHA
GHFYLANKNQRIMNVRPSMYFVEAPSTMNELLLAQHLLATTDDKRMRRWVILQLLGTYYHNFVTHLLEGEYQRRVYSLAE
EGEALTATTLTEIKTNVLSTFWGNSVEIDEGAGLTWMRQPHYYMGLYSYTYSAGLTASTAVAQMIKEEGQPAVDRWLDVL
RAGGTMKPLELMKHAGVDMSKPDAIRKAVSYVGSLIDELERSYEE

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69286; Mature: 69286

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVIEKRHIRAEVPIELTWDLSDLYESDKKWETALRVLTDDIKKLDAFKGQLHTSPTTL
CCHHHHHHHCCEECCEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LHCLLLEEELLMKLTKLYSYANLKESTDRTNPVIQANSSKIAALWTKVHTALSFIHNEIL
HHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
SLEEGTIEKYLTKETKLEPFRKSLLDILQKRQYTLSPETEEALAALGEVHSSPYKIYGMT
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEH
KLADMDFNSIQDEQGNELPVSFSLFESKYEFSPSVDIRRKAYSSFVSTLKRYKNTVATTY
HHCCCCCHHCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATEVKKQVTLSRLRKFESVTHMLLEPQNVPLEMYNNQLDIIYKELAPHMRRFADLKKKVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLDQMLFCDLHAPLDPEFNPAITYEEAGKLIQDSLQVLGDEYSAIIKKGFKERWVDLADN
CCHHHHHEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGKSTGAFCSSPYGSHPYILITWQNTMRGCFTLAHEFGHAGHFYLANKNQRIMNVRPSMY
CCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEE
FVEAPSTMNELLLAQHLLATTDDKRMRRWVILQLLGTYYHNFVTHLLEGEYQRRVYSLAE
EEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EGEALTATTLTEIKTNVLSTFWGNSVEIDEGAGLTWMRQPHYYMGLYSYTYSAGLTASTA
CCCCEEHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCEEHHHHHHHHCCCHHHHH
VAQMIKEEGQPAVDRWLDVLRAGGTMKPLELMKHAGVDMSKPDAIRKAVSYVGSLIDELE
HHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RSYEE
HHHCC
>Mature Secondary Structure
MKDVIEKRHIRAEVPIELTWDLSDLYESDKKWETALRVLTDDIKKLDAFKGQLHTSPTTL
CCHHHHHHHCCEECCEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LHCLLLEEELLMKLTKLYSYANLKESTDRTNPVIQANSSKIAALWTKVHTALSFIHNEIL
HHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
SLEEGTIEKYLTKETKLEPFRKSLLDILQKRQYTLSPETEEALAALGEVHSSPYKIYGMT
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEH
KLADMDFNSIQDEQGNELPVSFSLFESKYEFSPSVDIRRKAYSSFVSTLKRYKNTVATTY
HHCCCCCHHCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATEVKKQVTLSRLRKFESVTHMLLEPQNVPLEMYNNQLDIIYKELAPHMRRFADLKKKVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLDQMLFCDLHAPLDPEFNPAITYEEAGKLIQDSLQVLGDEYSAIIKKGFKERWVDLADN
CCHHHHHEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGKSTGAFCSSPYGSHPYILITWQNTMRGCFTLAHEFGHAGHFYLANKNQRIMNVRPSMY
CCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEE
FVEAPSTMNELLLAQHLLATTDDKRMRRWVILQLLGTYYHNFVTHLLEGEYQRRVYSLAE
EEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EGEALTATTLTEIKTNVLSTFWGNSVEIDEGAGLTWMRQPHYYMGLYSYTYSAGLTASTA
CCCCEEHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCEEHHHHHHHHCCCHHHHH
VAQMIKEEGQPAVDRWLDVLRAGGTMKPLELMKHAGVDMSKPDAIRKAVSYVGSLIDELE
HHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RSYEE
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]