Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ydbI [H]
Identifier: 49188276
GI number: 49188276
Start: 5177221
End: 5178255
Strand: Reverse
Name: ydbI [H]
Synonym: BAS5291
Alternate gene names: 49188276
Gene position: 5178255-5177221 (Counterclockwise)
Preceding gene: 49188277
Following gene: 49188275
Centisome position: 99.04
GC content: 31.88
Gene sequence:
>1035_bases ATGCAAATAAAAAACCTGTTTCAAAGCAAAGGATTTCAGAGGTTACTCGTATTAGTAATACTTGCTCTCGTGTTATATGG GCTGCAAAGTATGTTGAATTTAATATTAATTACGTTTATTCTTACGTATTTAATGGATCGATTCCAAAAGTTTATTTCTC GCAAATTAGACCACTTTATGCCCATTAATCGAAAGCTCATTATAGCATTTCTATATGTCATGTTAATTGGTGGAATTGCT ATTACGCTATTTAAATATTTACCAGTGTTAACAATACAAATTTCACAATTAATTTATCAATTTAACGTATTTTTAAGAAA CCCACCAGATAGTGAATTAATTAAGTATGCAGTTAATGCTGTCAATCATATGGAACTTTCGAAGTATGTAGGACAAGGCG TTGACATTTTGTATAAATCGATTACGAATGTTGGAAAATTTGGCCTTCAAGTGTTACTTTCTTTAATCTTAAGTTTATTT TTCTTATTGGAGAAAGCTCGCATCGTTGCTTTTACTGCAAAATTTAAAGAAAGTCGACTTGCAATTTTCTATACTGAAAT CGAGTACTTCGGTAAGAAATTTGCACGTTCATTCGGAAAAGTAATCGAAGCCCAATTTTTAATTGCAGTTGTTAACTGCG TTTTATCCGTTATTGCACTATGGATATTAGGATTCCCACAATTATTAGGTTTAGCATTAATGATCTTCTTACTTGGTTTA ATTCCAGTAGCTGGGGTTATCATTTCGTTATTCCCGCTTTGTATGATTGCTTACAATATCGGCGGTATTATGTACGTGGT TTATATTTTAGTTATCGTAACAGTCATTCATGCGCTTGAAAGTTACGTGTTAAATCCGAAGTTTATGTCGCAAAAAACAA ACTTACCTATTTTCTATACGTTTATGGTATTAATCTTCTCAGAACACTTCTTAGGTGTGTGGGGATTAATTATCGGTATT CCAATCTTTATTTTCTTATTAGATGTCTTAGATGTGACAAGTGATGAAATGGAGAAGGACGTTAGAACAAAATAA
Upstream 100 bases:
>100_bases TAAAAATCTTAATATGAATGAATAATTAAAAGTAGAAAAGAGAGAAAAATCTACTTATTAACGTTTTACTTTATAGGACA GGAGAGAGTACTCGTCGATT
Downstream 100 bases:
>100_bases AGCGAAGAAAAGAAAAAGCATCGATTTTCGATGCTTTTTCTTTTATAACATGATGTTTCTTATGCCATACTGTAAGGAGA AGATAGAATAGGGGTGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MQIKNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIA ITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLF FLLEKARIVAFTAKFKESRLAIFYTEIEYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGL IPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGI PIFIFLLDVLDVTSDEMEKDVRTK
Sequences:
>Translated_344_residues MQIKNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIA ITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLF FLLEKARIVAFTAKFKESRLAIFYTEIEYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGL IPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGI PIFIFLLDVLDVTSDEMEKDVRTK >Mature_344_residues MQIKNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIA ITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLF FLLEKARIVAFTAKFKESRLAIFYTEIEYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGL IPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGI PIFIFLLDVLDVTSDEMEKDVRTK
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 39275; Mature: 39275
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFM CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PINRKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AIFYTEIEYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH FMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVRTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure MQIKNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFM CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PINRKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AIFYTEIEYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH FMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVRTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]