Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yidA [H]
Identifier: 49188233
GI number: 49188233
Start: 5131338
End: 5132159
Strand: Direct
Name: yidA [H]
Synonym: BAS5248
Alternate gene names: 49188233
Gene position: 5131338-5132159 (Clockwise)
Preceding gene: 49188232
Following gene: 49188234
Centisome position: 98.14
GC content: 35.64
Gene sequence:
>822_bases ATGACTTATAAAATGATTGTTTTAGATTTAGATGATACGTTATTACGTGATGACCATACTATTTCACCTCGTACGAAAGA AGCTCTAATGACTGCGCAAGAGCAAGGAGTAAAAGTGGTACTTGCTTCCGGACGTCCAACATTCGGTATGCGCAATGTAG CGAAAGAACTTCGTTTAGAAGAATACGGTAGTTTCATTCTATCTTTTAATGGCGCAAAAATTATTAACTGTAAAACAAAT GAAGAAATCTTTAGTAGTACGCTTTCTCCTGAAATCGTTCACAATCTATTTGAAATTAGTAAAACTGAAGGTGTATGGAT TCACACTTATATTGGCGATGATATCGTAACAGAAGAAAATAATCCTTATACTGAAATTGAGGGCGATATTACTGGTATGC CAATTGTTGTAGTAGATGACTTTAAAGCTGCTGTTAAAGAGCCTGTAGTAAAAGTATTAATGAATAAAGAAGCTGAACGC CTTGTTGAAGTAGAAAAGAAACTACAAAAACAACTAGAAGGACAATTAAGCGTTATGCGTTCTAAACCATTCTTCTTAGA ATTTACTGAAGCTGGTGTTACAAAAGGAACGAGCTTAAACCAATTAATCCAAAAGCTTGGCATTAAGCGTGAAGAAGTTA TCGCAATGGGCGATAGCTATAACGATCAGGCGATGATTGAATTTGCTGGTCTTGGTGTTGCAATGGGCAATGCACCTGAT GATATTAAGGAAATTGCAAACTATGTAACAGATACAAATATGAACGATGGCGTTGCAAAAGTTGTAGAGAAGTTTGTACT AAAAAGAGAAGCGCTTGTTTAA
Upstream 100 bases:
>100_bases GATAATTTATCTACTTCTTTCCTAAGAAGTTCGATGTCTTACTATTATTCCTTAACATCTTCATTAACATGTAATTTAAA TAAAGAAGGGAACTTTCAAT
Downstream 100 bases:
>100_bases TATTTCCACCCATAAAACCTATTTGAAGTCAAATACTTCAAATAGGTTTTTATTTAAATTACCATGCTTTTGTGACTATA TTTTGAACTTTGCACTATTC
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLEEYGSFILSFNGAKIINCKTN EEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEENNPYTEIEGDITGMPIVVVDDFKAAVKEPVVKVLMNKEAER LVEVEKKLQKQLEGQLSVMRSKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV
Sequences:
>Translated_273_residues MTYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLEEYGSFILSFNGAKIINCKTN EEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEENNPYTEIEGDITGMPIVVVDDFKAAVKEPVVKVLMNKEAER LVEVEKKLQKQLEGQLSVMRSKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV >Mature_272_residues TYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLEEYGSFILSFNGAKIINCKTNE EIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEENNPYTEIEGDITGMPIVVVDDFKAAVKEPVVKVLMNKEAERL VEVEKKLQKQLEGQLSVMRSKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPDD IKEIANYVTDTNMNDGVAKVVEKFVLKREALV
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=269, Percent_Identity=37.9182156133829, Blast_Score=183, Evalue=9e-48, Organism=Escherichia coli, GI48994981, Length=277, Percent_Identity=28.5198555956679, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786982, Length=276, Percent_Identity=26.0869565217391, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787043, Length=272, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87081790, Length=282, Percent_Identity=26.241134751773, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87081741, Length=235, Percent_Identity=23.8297872340426, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 30484; Mature: 30353
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLE CCEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH EYGSFILSFNGAKIINCKTNEEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEEN HHCCEEEEECCCEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCEEECCC NPYTEIEGDITGMPIVVVDDFKAAVKEPVVKVLMNKEAERLVEVEKKLQKQLEGQLSVMR CCCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH SKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD CCCCEEEECCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCEEEEEECCEEEECCCCH DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLE CEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH EYGSFILSFNGAKIINCKTNEEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEEN HHCCEEEEECCCEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCEEECCC NPYTEIEGDITGMPIVVVDDFKAAVKEPVVKVLMNKEAERLVEVEKKLQKQLEGQLSVMR CCCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH SKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD CCCCEEEECCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCEEEEEECCEEEECCCCH DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]