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The map label for this gene is ywdK [H]

Identifier: 49188228

GI number: 49188228

Start: 5128071

End: 5128439

Strand: Reverse

Name: ywdK [H]

Synonym: BAS5243

Alternate gene names: 49188228

Gene position: 5128439-5128071 (Counterclockwise)

Preceding gene: 49188229

Following gene: 49188223

Centisome position: 98.08

GC content: 38.48

Gene sequence:

>369_bases
ATGAAAATTTTCTTTTTACTAGGTTGTATTGTAGCGGGGCTATCTGTTGCGTTAGGAGCATTTGGAGCACACGGTTTAGA
AAATAAAATTTCTGCAAAAATGTTAGAAGTTTGGAAAACAGGTGTTACATATCAAATGTTCCATGCAGGTGGGCTATTCG
TAGTTGCATTATTGATGGATAAGATACAATCATCACTTTTAACTACTGCTGGTTGGCTTATGGTAGCTGGGATTATTATG
TTCTCAGGTAGTCTGTATGCGCTAAGCACAACAGGGATTAAGTTTTTTGGTCCAATTACACCTCTTGGTGGTGTAGCGTT
TATCGTGGCATGGATCTTAGTTGGAACTGCAGTTGTAAAAGGGCTATAA

Upstream 100 bases:

>100_bases
AGTGATGCAAACGGTAATTCTTTATTTGATTTTTAGGAGATAAATCGTTTGGCTTATATGTAAAAATTGCTTATGATAAA
GGTAAAAAAGGGGAATTAAG

Downstream 100 bases:

>100_bases
AGAACAAAAGCTGGCATATGCCAGCTTTTTTTATGGTCTTGGAGCATAAGTTGCTTGTTGACTCGGTAAATACGTAATTT
CTTCTGGGAATTCTACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKIFFLLGCIVAGLSVALGAFGAHGLENKISAKMLEVWKTGVTYQMFHAGGLFVVALLMDKIQSSLLTTAGWLMVAGIIM
FSGSLYALSTTGIKFFGPITPLGGVAFIVAWILVGTAVVKGL

Sequences:

>Translated_122_residues
MKIFFLLGCIVAGLSVALGAFGAHGLENKISAKMLEVWKTGVTYQMFHAGGLFVVALLMDKIQSSLLTTAGWLMVAGIIM
FSGSLYALSTTGIKFFGPITPLGGVAFIVAWILVGTAVVKGL
>Mature_122_residues
MKIFFLLGCIVAGLSVALGAFGAHGLENKISAKMLEVWKTGVTYQMFHAGGLFVVALLMDKIQSSLLTTAGWLMVAGIIM
FSGSLYALSTTGIKFFGPITPLGGVAFIVAWILVGTAVVKGL

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=107, Percent_Identity=36.4485981308411, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 12785; Mature: 12785

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFFLLGCIVAGLSVALGAFGAHGLENKISAKMLEVWKTGVTYQMFHAGGLFVVALLMD
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KIQSSLLTTAGWLMVAGIIMFSGSLYALSTTGIKFFGPITPLGGVAFIVAWILVGTAVVK
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHH
GL
CC
>Mature Secondary Structure
MKIFFLLGCIVAGLSVALGAFGAHGLENKISAKMLEVWKTGVTYQMFHAGGLFVVALLMD
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KIQSSLLTTAGWLMVAGIIMFSGSLYALSTTGIKFFGPITPLGGVAFIVAWILVGTAVVK
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHH
GL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]