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The map label for this gene is fadF [H]

Identifier: 49188180

GI number: 49188180

Start: 5074762

End: 5076873

Strand: Reverse

Name: fadF [H]

Synonym: BAS5194

Alternate gene names: 49188180

Gene position: 5076873-5074762 (Counterclockwise)

Preceding gene: 49188184

Following gene: 49188179

Centisome position: 97.1

GC content: 41.24

Gene sequence:

>2112_bases
ATGAATAGCTTACTGATCATTAATTGGCTGGCTGCCATTGCTGTTATTGCTTATGCGGGATATTTGTTTGTGTATCTTAT
ACGAACGAGGATGGCCTACATACAGTTAGGAAAAAAGATTGAATTTGACCGTCGTTTTAAAGAGCGTTGGGATCTCCTTA
AGGTCAATGTTTTCGGTCAGAAAAAGCTGCTGAAAGATAAAAAGAGCGGCATTATTCACGTTATGTTCTTTTACGGATTT
ATTCTTGTCCAATTTGGAGCAATTGACTTCGTTTGGAAAGGACTCGCACCAGGATCACATCTTCCACTTGGACCACTATA
CCCTGCATTTACATTCTTCCAGGAAATTGTCACACTTGTTATTTTAATTGCAGTCTTTTGGGCTTTTCATAGACGCTATG
TTGAAAAGCTAGTTCGTTTAAAACGTAATTTCAAATCAGGTCTTGTTCTTATCTTTATTGGTGGCTTAATGATTTCTGTG
CTACTCGGTAATGGAATGGGAATTATATGGCATGGCGAGGAGCTTTCATGGAGTGAGCCAATCGCTTCTGCAATCGCTTA
CGTTTTCTCAGGGATAAATGAAACCGCAGCCATTTCTGTGTTCTATTTCTCTTGGTGGGTGCATTTACTAATTTTGTTAA
CGTTTTTAGTTTATGTTCCACAATCAAAACACGCACATTTAATTGCTGGACCAGCTAACGTTTTCTTCGGTCGTCTTTCA
AATCCAGGGAAACTTGAAAAGATTGACTTTGAAGATGAAACACAAGAAACATTTGGTGTTGGTAAAATCGAAGACTTTAG
ACAAAATCAGCTTATTGACTTATACGCTTGCGTAGAGTGTGGTCGTTGTACAAATATGTGTCCGGCAACAGGAACAGGGA
AAATGTTATCGCCGATGGATTTAATTTTAAAACTTCGCGATCATTTAACTGACAAAGGAGCAGCAGTAACATCAAAAGCG
CCTTGGGTTCCAGTAGTTGCTTTTAATAATACACAAGGAAATCAGTTAGCGATGATGGCAGCTGGGAAAGGGCAACAAGA
ATCAGCGGCTGCAACACTCGCTTACGATCCAAGTTTAATCGGGGATGTTATTACAGAAGAAGAGATTTGGGCTTGTACAA
CGTGTCGTAACTGTGAAGACCAGTGTCCGGTTATGAATGAGCATGTTGATAAAATTATTGATTTACGCCGTTATCTCGTT
TTAACAGAAGGAAAGATGGACGCGGAAGCACAGCGTGCGATGACAAACATCGAGCGTCAAGGGAATCCGTGGGGTCTAAA
CCGTAAAGAGCGTGAAACTTGGCGCCAAGGTGATGATGAAGTAACGGTTCCAACTGTAAAAGAAAAATCGAAAGCTGGCG
AGGAGTTCGAATATTTATTCTGGGTTGGTTCAATGGGATCGTACGATAACCGTAGTCAGAAGATTGTGATATCATTCGCG
AAGTTGATGAACGAAGCAGGCATTTCATTTGCGATTCTCGGTAATAAAGAGAAGAACTCTGGAGATACACCGCGCCGCCT
AGGAAATGAATTCGTCTTCCAAGAGATGGCGACAAAAAATATCGAGGAATTTGAAAAAGCAGGAGTGAAGAAAATCGTTA
CGATTGACCCTCATGCTTATAACACATTTAAAAATGAGTATCCAGACTTTGGCTTGCAAGCAGAAGTCTATCATCATACA
GAACTGTTAGCTCAGTGGGTGAAAGAAGGACGCTTAAAACCTGTTCACGCTATTGAGGAAACAGTTACGTACCATGATTC
CTGTTACTTAGGAAGATACAACGAAGTATACGAAGCCCCGCGTGACATTTTGAAAGCGATTCCTGGTGTGAATCTTGTAG
AAATGGCACGTAACCGTGAAACGGGAATGTGCTGTGGAGCAGGTGGTGGCTTAATGTGGATGGAGGAAACAACAGGTTCT
CGTATTAACGTTGCTCGTACAGAACAAGCGCTAGCTGTGCAACCATCCATTATCGGTACAGGTTGTCCATATTGCTTAAC
GATGATTAGTGATGGGACGAAAGCGAAAGAAGTAGAAGAGAAGGTTCAAACGCTTGATGTAACAGAGATTTTAGAACGCT
CTGTTATCGGACAGAAGAAAGAAGCGATGTAA

Upstream 100 bases:

>100_bases
TCATTATATAATGAAGATAGGGGATAAAATTCAGAAAATTATATGTTTTTGAAGATTCTAAAAAAGAAAGAGGGCTTACA
AAGAGAGGGGTAGCATAAAA

Downstream 100 bases:

>100_bases
TCTGCAAGCATGAATACAACTTTAGAGAGAGGTGCAATCATTGCACCTCTTCTCAGCGTAACAATGCCGAGCAAGCGCTC
GGTGCTAAAAAAGAAATGGG

Product: ferredoxin, 4Fe-4S

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MNSLLIINWLAAIAVIAYAGYLFVYLIRTRMAYIQLGKKIEFDRRFKERWDLLKVNVFGQKKLLKDKKSGIIHVMFFYGF
ILVQFGAIDFVWKGLAPGSHLPLGPLYPAFTFFQEIVTLVILIAVFWAFHRRYVEKLVRLKRNFKSGLVLIFIGGLMISV
LLGNGMGIIWHGEELSWSEPIASAIAYVFSGINETAAISVFYFSWWVHLLILLTFLVYVPQSKHAHLIAGPANVFFGRLS
NPGKLEKIDFEDETQETFGVGKIEDFRQNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKA
PWVPVVAFNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV
LTEGKMDAEAQRAMTNIERQGNPWGLNRKERETWRQGDDEVTVPTVKEKSKAGEEFEYLFWVGSMGSYDNRSQKIVISFA
KLMNEAGISFAILGNKEKNSGDTPRRLGNEFVFQEMATKNIEEFEKAGVKKIVTIDPHAYNTFKNEYPDFGLQAEVYHHT
ELLAQWVKEGRLKPVHAIEETVTYHDSCYLGRYNEVYEAPRDILKAIPGVNLVEMARNRETGMCCGAGGGLMWMEETTGS
RINVARTEQALAVQPSIIGTGCPYCLTMISDGTKAKEVEEKVQTLDVTEILERSVIGQKKEAM

Sequences:

>Translated_703_residues
MNSLLIINWLAAIAVIAYAGYLFVYLIRTRMAYIQLGKKIEFDRRFKERWDLLKVNVFGQKKLLKDKKSGIIHVMFFYGF
ILVQFGAIDFVWKGLAPGSHLPLGPLYPAFTFFQEIVTLVILIAVFWAFHRRYVEKLVRLKRNFKSGLVLIFIGGLMISV
LLGNGMGIIWHGEELSWSEPIASAIAYVFSGINETAAISVFYFSWWVHLLILLTFLVYVPQSKHAHLIAGPANVFFGRLS
NPGKLEKIDFEDETQETFGVGKIEDFRQNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKA
PWVPVVAFNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV
LTEGKMDAEAQRAMTNIERQGNPWGLNRKERETWRQGDDEVTVPTVKEKSKAGEEFEYLFWVGSMGSYDNRSQKIVISFA
KLMNEAGISFAILGNKEKNSGDTPRRLGNEFVFQEMATKNIEEFEKAGVKKIVTIDPHAYNTFKNEYPDFGLQAEVYHHT
ELLAQWVKEGRLKPVHAIEETVTYHDSCYLGRYNEVYEAPRDILKAIPGVNLVEMARNRETGMCCGAGGGLMWMEETTGS
RINVARTEQALAVQPSIIGTGCPYCLTMISDGTKAKEVEEKVQTLDVTEILERSVIGQKKEAM
>Mature_703_residues
MNSLLIINWLAAIAVIAYAGYLFVYLIRTRMAYIQLGKKIEFDRRFKERWDLLKVNVFGQKKLLKDKKSGIIHVMFFYGF
ILVQFGAIDFVWKGLAPGSHLPLGPLYPAFTFFQEIVTLVILIAVFWAFHRRYVEKLVRLKRNFKSGLVLIFIGGLMISV
LLGNGMGIIWHGEELSWSEPIASAIAYVFSGINETAAISVFYFSWWVHLLILLTFLVYVPQSKHAHLIAGPANVFFGRLS
NPGKLEKIDFEDETQETFGVGKIEDFRQNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKA
PWVPVVAFNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLV
LTEGKMDAEAQRAMTNIERQGNPWGLNRKERETWRQGDDEVTVPTVKEKSKAGEEFEYLFWVGSMGSYDNRSQKIVISFA
KLMNEAGISFAILGNKEKNSGDTPRRLGNEFVFQEMATKNIEEFEKAGVKKIVTIDPHAYNTFKNEYPDFGLQAEVYHHT
ELLAQWVKEGRLKPVHAIEETVTYHDSCYLGRYNEVYEAPRDILKAIPGVNLVEMARNRETGMCCGAGGGLMWMEETTGS
RINVARTEQALAVQPSIIGTGCPYCLTMISDGTKAKEVEEKVQTLDVTEILERSVIGQKKEAM

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 79224; Mature: 79224

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLIINWLAAIAVIAYAGYLFVYLIRTRMAYIQLGKKIEFDRRFKERWDLLKVNVFGQ
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCC
KKLLKDKKSGIIHVMFFYGFILVQFGAIDFVWKGLAPGSHLPLGPLYPAFTFFQEIVTLV
HHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ILIAVFWAFHRRYVEKLVRLKRNFKSGLVLIFIGGLMISVLLGNGMGIIWHGEELSWSEP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH
IASAIAYVFSGINETAAISVFYFSWWVHLLILLTFLVYVPQSKHAHLIAGPANVFFGRLS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCC
NPGKLEKIDFEDETQETFGVGKIEDFRQNQLIDLYACVECGRCTNMCPATGTGKMLSPMD
CCCCEEECCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LILKLRDHLTDKGAAVTSKAPWVPVVAFNNTQGNQLAMMAAGKGQQESAAATLAYDPSLI
HHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECHHHH
GDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVLTEGKMDAEAQRAMTNIERQ
HHHHCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHC
GNPWGLNRKERETWRQGDDEVTVPTVKEKSKAGEEFEYLFWVGSMGSYDNRSQKIVISFA
CCCCCCCCHHHHHHHCCCCCEECCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHH
KLMNEAGISFAILGNKEKNSGDTPRRLGNEFVFQEMATKNIEEFEKAGVKKIVTIDPHAY
HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCHH
NTFKNEYPDFGLQAEVYHHTELLAQWVKEGRLKPVHAIEETVTYHDSCYLGRYNEVYEAP
HHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHH
RDILKAIPGVNLVEMARNRETGMCCGAGGGLMWMEETTGSRINVARTEQALAVQPSIIGT
HHHHHHCCCCCHHHHHCCCCCCEEEECCCCEEEEECCCCCEEEEEECCHHHEECCCCCCC
GCPYCLTMISDGTKAKEVEEKVQTLDVTEILERSVIGQKKEAM
CCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MNSLLIINWLAAIAVIAYAGYLFVYLIRTRMAYIQLGKKIEFDRRFKERWDLLKVNVFGQ
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCC
KKLLKDKKSGIIHVMFFYGFILVQFGAIDFVWKGLAPGSHLPLGPLYPAFTFFQEIVTLV
HHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ILIAVFWAFHRRYVEKLVRLKRNFKSGLVLIFIGGLMISVLLGNGMGIIWHGEELSWSEP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH
IASAIAYVFSGINETAAISVFYFSWWVHLLILLTFLVYVPQSKHAHLIAGPANVFFGRLS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCC
NPGKLEKIDFEDETQETFGVGKIEDFRQNQLIDLYACVECGRCTNMCPATGTGKMLSPMD
CCCCEEECCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LILKLRDHLTDKGAAVTSKAPWVPVVAFNNTQGNQLAMMAAGKGQQESAAATLAYDPSLI
HHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECHHHH
GDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVLTEGKMDAEAQRAMTNIERQ
HHHHCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHC
GNPWGLNRKERETWRQGDDEVTVPTVKEKSKAGEEFEYLFWVGSMGSYDNRSQKIVISFA
CCCCCCCCHHHHHHHCCCCCEECCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHH
KLMNEAGISFAILGNKEKNSGDTPRRLGNEFVFQEMATKNIEEFEKAGVKKIVTIDPHAY
HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCHH
NTFKNEYPDFGLQAEVYHHTELLAQWVKEGRLKPVHAIEETVTYHDSCYLGRYNEVYEAP
HHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHH
RDILKAIPGVNLVEMARNRETGMCCGAGGGLMWMEETTGSRINVARTEQALAVQPSIIGT
HHHHHHCCCCCHHHHHCCCCCCEEEECCCCEEEEECCCCCEEEEEECCHHHEECCCCCCC
GCPYCLTMISDGTKAKEVEEKVQTLDVTEILERSVIGQKKEAM
CCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]