Click here to switch to the map view.

The map label for this gene is 49188175

Identifier: 49188175

GI number: 49188175

Start: 5069510

End: 5070139

Strand: Reverse

Name: 49188175

Synonym: BAS5189

Alternate gene names: NA

Gene position: 5070139-5069510 (Counterclockwise)

Preceding gene: 49188176

Following gene: 49188174

Centisome position: 96.97

GC content: 34.29

Gene sequence:

>630_bases
ATGGTTAAACATAATGTGCACGCATCAGTGAAAGATGAAAAATTAGTCGCGTTAAGACGTGAACAAATGATTAAAGGTGC
GGTGCAATTGTTTAAGCAAAAAGGATTTCCGCGTACAACAACGAGAGAGATTGCAAAGGCTGCTGGGTTTAGTATTGGAA
CACTTTATGAATATATCCGTACAAAAGATGATGTTTTGTATTTAGTTTGTGATAGTATTTATGAACATGTAAAAGAAAGA
TTAGAGGAAGTAGTTTGTACAGAAAAAGGAAGTGTAGAAAGTTTAAAGATAGCAATAACGAATTATTTTAAAGTGATGGA
CGAATTGCAGGAAGAAGTATTAATCATGTATCAAGAGGTACGCTTTTTACCGAAAGAATCACTCCCGTACGTATTAGAAA
AGGAGTTTCAAATGGTAGGAATGTTTGAGAATATTTTAGAACAGTGTACGGAAAATGGAACATTTACATTAAATAAAAAA
GAAATACAGCTTCTTGCGCATAATATTTTTATACAAGGACAGATGTGGGGATTTAGACGTTGGGCGTTGCAAAAGCTATA
TACGCTCGAGGAATATACAGAAATGCAAATTAGGTATGTATTGCAAGGGGCTCATATGCTTCCGAAATAA

Upstream 100 bases:

>100_bases
CAAAGGCTCGTAATTTCTCGTATGTTAACGAAGTAGGATCGAAGGCGTAGGTATTTTCCTACGCTTTTTCCTTCCAAAAA
ATAATAGAGGGGTGAAGGGG

Downstream 100 bases:

>100_bases
GGAATGGACAAATTATAAATTTATTACCCTATAAAAGTTTCCCGTTTTTTTTGTAGCATATTTGTGCGACTTTTGTTTAT
AATGAATAGTATGGATTTTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcription Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MVKHNVHASVKDEKLVALRREQMIKGAVQLFKQKGFPRTTTREIAKAAGFSIGTLYEYIRTKDDVLYLVCDSIYEHVKER
LEEVVCTEKGSVESLKIAITNYFKVMDELQEEVLIMYQEVRFLPKESLPYVLEKEFQMVGMFENILEQCTENGTFTLNKK
EIQLLAHNIFIQGQMWGFRRWALQKLYTLEEYTEMQIRYVLQGAHMLPK

Sequences:

>Translated_209_residues
MVKHNVHASVKDEKLVALRREQMIKGAVQLFKQKGFPRTTTREIAKAAGFSIGTLYEYIRTKDDVLYLVCDSIYEHVKER
LEEVVCTEKGSVESLKIAITNYFKVMDELQEEVLIMYQEVRFLPKESLPYVLEKEFQMVGMFENILEQCTENGTFTLNKK
EIQLLAHNIFIQGQMWGFRRWALQKLYTLEEYTEMQIRYVLQGAHMLPK
>Mature_209_residues
MVKHNVHASVKDEKLVALRREQMIKGAVQLFKQKGFPRTTTREIAKAAGFSIGTLYEYIRTKDDVLYLVCDSIYEHVKER
LEEVVCTEKGSVESLKIAITNYFKVMDELQEEVLIMYQEVRFLPKESLPYVLEKEFQMVGMFENILEQCTENGTFTLNKK
EIQLLAHNIFIQGQMWGFRRWALQKLYTLEEYTEMQIRYVLQGAHMLPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24615; Mature: 24615

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHNVHASVKDEKLVALRREQMIKGAVQLFKQKGFPRTTTREIAKAAGFSIGTLYEYIR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH
TKDDVLYLVCDSIYEHVKERLEEVVCTEKGSVESLKIAITNYFKVMDELQEEVLIMYQEV
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFLPKESLPYVLEKEFQMVGMFENILEQCTENGTFTLNKKEIQLLAHNIFIQGQMWGFRR
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHEEECCHHHHHH
WALQKLYTLEEYTEMQIRYVLQGAHMLPK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVKHNVHASVKDEKLVALRREQMIKGAVQLFKQKGFPRTTTREIAKAAGFSIGTLYEYIR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH
TKDDVLYLVCDSIYEHVKERLEEVVCTEKGSVESLKIAITNYFKVMDELQEEVLIMYQEV
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFLPKESLPYVLEKEFQMVGMFENILEQCTENGTFTLNKKEIQLLAHNIFIQGQMWGFRR
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHEEECCHHHHHH
WALQKLYTLEEYTEMQIRYVLQGAHMLPK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA