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The map label for this gene is spoIIR [H]

Identifier: 49188162

GI number: 49188162

Start: 5055941

End: 5056807

Strand: Reverse

Name: spoIIR [H]

Synonym: BAS5176

Alternate gene names: 49188162

Gene position: 5056807-5055941 (Counterclockwise)

Preceding gene: 49188163

Following gene: 49188161

Centisome position: 96.71

GC content: 35.18

Gene sequence:

>867_bases
ATGAAAAAACAAGTTATTGCTTATCTTCTTTTATTATTAATTGGTGCACAGTTACTTGTGCAGTTTGGATATATGAAAGC
TGATGCGAAAGGACCTTCAGTTATTCCGAAAGAGGCCGTTCGATTACGGATTTTAGCAAATAGTGATTCAGATAAAGATC
AGGCGTTAAAGCGCAAAGTGCGTGATGAAGTAAAAGCACAAATTGATGGATGGGTAGCTGATTTAACTTCATTTGAAGAA
GCGCGCAAAGTCATTCAAAGTCATATTCCAGAAATCGAAAAAACAGTGGCAAATACGTTGAAAAAAGAAGGAAGCAAAGA
TTCATTCCAAGTGAAATTCAGTAAAAATGTAAAGTTTCCTACAAAGGTATATGGGAATTTTATTTATCCAGCAGGGGAAT
ATGAAGCAGTTTTAATTACAATTGGGGAAGGAGAAGGGGCAAACTGGTGGTGTGTATTATTTCCACCGATGTGTTTCTTA
GATTTTTCAAGTGGTACAGCTGTAAGGAAAGAAGAACATGTTGTGAAGGCTGAATCTCCAGAAGAGGAGCAAGTAAAACA
AATAGATGATGAAGAGGTAGTAGATACAGAAGAGAAAAAGGAGGATGAGGTGAAAGAAAAGAAAGTTGTAAAGCAGGAAG
TCGCAACAAAAGTAACAGCTTCTGAAAAGAAAGTAGTAAAAAATGAAACAAAAGTAGAAGAACAACCTGTAAGTAAAGAG
GAAACAAAAACTGTGGAAAAAGTGGAGAAACCTGTGGAGCAAAAACAAGAAAAACAAAATGAGTATGTAAAAGTAGAAGA
GGAAGAAGAAGAGCCAGAAGTTAAGTTATTTATTGTAGAAGCTTTTACATCTTTATTCTCTAAATAG

Upstream 100 bases:

>100_bases
ACTCTATTTTTTTGTGGAAAAATTCATATAGATTTTGAATTTAATAGTTTAGAAAGATGAAAGTCTGTCCACACTGTTTG
TAGAAGGGACGGTGGAGGAA

Downstream 100 bases:

>100_bases
TACTATTCGTAAATCCCTTCTCATATATAAAAAAGAGGAGGGATTTATTATGAAGAAGGTATATTTTGCGACGAAAGCAG
ATGTGGAAAGATTGCATTCT

Product: stage II sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKQVIAYLLLLLIGAQLLVQFGYMKADAKGPSVIPKEAVRLRILANSDSDKDQALKRKVRDEVKAQIDGWVADLTSFEE
ARKVIQSHIPEIEKTVANTLKKEGSKDSFQVKFSKNVKFPTKVYGNFIYPAGEYEAVLITIGEGEGANWWCVLFPPMCFL
DFSSGTAVRKEEHVVKAESPEEEQVKQIDDEEVVDTEEKKEDEVKEKKVVKQEVATKVTASEKKVVKNETKVEEQPVSKE
ETKTVEKVEKPVEQKQEKQNEYVKVEEEEEEPEVKLFIVEAFTSLFSK

Sequences:

>Translated_288_residues
MKKQVIAYLLLLLIGAQLLVQFGYMKADAKGPSVIPKEAVRLRILANSDSDKDQALKRKVRDEVKAQIDGWVADLTSFEE
ARKVIQSHIPEIEKTVANTLKKEGSKDSFQVKFSKNVKFPTKVYGNFIYPAGEYEAVLITIGEGEGANWWCVLFPPMCFL
DFSSGTAVRKEEHVVKAESPEEEQVKQIDDEEVVDTEEKKEDEVKEKKVVKQEVATKVTASEKKVVKNETKVEEQPVSKE
ETKTVEKVEKPVEQKQEKQNEYVKVEEEEEEPEVKLFIVEAFTSLFSK
>Mature_288_residues
MKKQVIAYLLLLLIGAQLLVQFGYMKADAKGPSVIPKEAVRLRILANSDSDKDQALKRKVRDEVKAQIDGWVADLTSFEE
ARKVIQSHIPEIEKTVANTLKKEGSKDSFQVKFSKNVKFPTKVYGNFIYPAGEYEAVLITIGEGEGANWWCVLFPPMCFL
DFSSGTAVRKEEHVVKAESPEEEQVKQIDDEEVVDTEEKKEDEVKEKKVVKQEVATKVTASEKKVVKNETKVEEQPVSKE
ETKTVEKVEKPVEQKQEKQNEYVKVEEEEEEPEVKLFIVEAFTSLFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 32789; Mature: 32789

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQVIAYLLLLLIGAQLLVQFGYMKADAKGPSVIPKEAVRLRILANSDSDKDQALKRKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHH
RDEVKAQIDGWVADLTSFEEARKVIQSHIPEIEKTVANTLKKEGSKDSFQVKFSKNVKFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
TKVYGNFIYPAGEYEAVLITIGEGEGANWWCVLFPPMCFLDFSSGTAVRKEEHVVKAESP
HHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCHHHCEECCCCC
EEEQVKQIDDEEVVDTEEKKEDEVKEKKVVKQEVATKVTASEKKVVKNETKVEEQPVSKE
CHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ETKTVEKVEKPVEQKQEKQNEYVKVEEEEEEPEVKLFIVEAFTSLFSK
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHHHHHHHCC
>Mature Secondary Structure
MKKQVIAYLLLLLIGAQLLVQFGYMKADAKGPSVIPKEAVRLRILANSDSDKDQALKRKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHH
RDEVKAQIDGWVADLTSFEEARKVIQSHIPEIEKTVANTLKKEGSKDSFQVKFSKNVKFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
TKVYGNFIYPAGEYEAVLITIGEGEGANWWCVLFPPMCFLDFSSGTAVRKEEHVVKAESP
HHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCHHHCEECCCCC
EEEQVKQIDDEEVVDTEEKKEDEVKEKKVVKQEVATKVTASEKKVVKNETKVEEQPVSKE
CHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ETKTVEKVEKPVEQKQEKQNEYVKVEEEEEEPEVKLFIVEAFTSLFSK
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]