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The map label for this gene is atpC

Identifier: 49188140

GI number: 49188140

Start: 5038719

End: 5039120

Strand: Reverse

Name: atpC

Synonym: BAS5154

Alternate gene names: 49188140

Gene position: 5039120-5038719 (Counterclockwise)

Preceding gene: 49188141

Following gene: 49188139

Centisome position: 96.37

GC content: 40.05

Gene sequence:

>402_bases
ATGAAGACATTTCCAGTCAGTATTGTAACTCCTGATGGACCGGTTTACGAAAAAGAAGTAGAAATGGTAAGTGTAAAAGC
AGAGAGTGGGGAAATGGGGATTTTACCAGGTCACATTCCAACTGTTGCACCATTAAAAATTAGTGCAGTTCGTCTGAAAA
ATGGTGGACATACTGATTATGTAGCAGTAAGTGGTGGCTTTATCGAAGTTCGTCCAGATAAAGTAACTGTATTATCATCA
TCTGCTGAAGAAGCAAACCATATCGATATCCATCGTGCAAATGAAGCGAAGCGTCGTGCTGAGCAACGTATGCAAGATAA
GCAAGCACATGTTGACTTTAAACGTGCAGAAATGGCATTACAACGTGCTGTGAACCGTTTAAACGTTTCCGATATGAAAT
AA

Upstream 100 bases:

>100_bases
ATGACCTTCCAGAAGATGCATTCCGCTTAGTTGGTGGCATTGAAGAAGTTATTGAAAACGCGAAGAAAATGATGGCGTAA
GGCCTTAGGAGGGACGAAGT

Downstream 100 bases:

>100_bases
AAAAAACCGTAAAGGCTTTGCCTTTACGGTTTTTTTATGGATAATTTTACAAAAATGGTATACTTATGTTGATGCTTGTA
TAAGTAGAGAATGTACAACA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVTVLSS
SAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFKRAEMALQRAVNRLNVSDMK

Sequences:

>Translated_133_residues
MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVTVLSS
SAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFKRAEMALQRAVNRLNVSDMK
>Mature_133_residues
MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVTVLSS
SAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFKRAEMALQRAVNRLNVSDMK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=131, Percent_Identity=34.3511450381679, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_BACAA (C3P1F3)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002869519.1
- ProteinModelPortal:   C3P1F3
- SMR:   C3P1F3
- EnsemblBacteria:   EBBACT00000130539
- GeneID:   7851412
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_5574
- GeneTree:   EBGT00050000001943
- ProtClustDB:   PRK00571
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14662; Mature: 14662

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDY
CCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEEEEECCCCCCCE
VAVSGGFIEVRPDKVTVLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFKRAEMAL
EEEECCEEEECCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHH
QRAVNRLNVSDMK
HHHHHHCCCCCCC
>Mature Secondary Structure
MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDY
CCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEEEEECCCCCCCE
VAVSGGFIEVRPDKVTVLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFKRAEMAL
EEEECCEEEECCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHH
QRAVNRLNVSDMK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA