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The map label for this gene is ywmB [H]

Identifier: 49188124

GI number: 49188124

Start: 5022545

End: 5023255

Strand: Reverse

Name: ywmB [H]

Synonym: BAS5138

Alternate gene names: 49188124

Gene position: 5023255-5022545 (Counterclockwise)

Preceding gene: 49188125

Following gene: 49188123

Centisome position: 96.07

GC content: 34.32

Gene sequence:

>711_bases
ATGAAATTGAAGCTTAAAGCCATTCTTATTGTTGCACTTAGTGTTGTTTTATTTTTGGTTGGGTATAGAGAGATGAAACC
AATCAGTGATGAGCAGAAGATGGAAAGCATGATCGCATCCTTAGAGAAAAATGATGCGAAAGTAGAGAAATGGTCATGGT
TAGCGCGAGAAACAAAAACAATTTCTAATATACATACGTTTCAAAAGTTGTTAAACGATGTGAAGGAGAAGGCGAATATT
CAAAAGTGGGAATTAGAGCAATCTCCAGATGGATATAAAGCTACATCCTATAAAAAATTTTCTTCTTATGAAGAACGAGT
AGTAGTAACTTGGAGTAAGGAAAATACTAAAGAAAACACTTTCATTATTTTTGAAGTGAGCGGGGCAAAATGGGACCCGA
AGTATATTCAAAAAACGAATAAAATTTTTAGTGAAAAACCTATAATTTACACTTGTGTTCAAGGTGTACTGAATGATAAG
ATTGAAGGTGTTTTGCAAAATAAAACCAATCAGGTTTTGAAAGATCTTTCAGCAAGAGCGATCGAACAGATAGAAGAAAG
AGCATTTGTGTCAGTCTCCGCATACAATAAAAAGTGGGATGACGCTCTTTCAACAAATAGAGAGAAAATAAATGTGCAAA
TAGCAATACGTTCTACAGACAACAAAGATACAATTGTGGTTGGCACACCGATCATAACTTCTGAGTATTGA

Upstream 100 bases:

>100_bases
CTTTTTCCTTGATTATTTAGGCTATTCAAAGAGTTTAACGTATTTAGTAAAGTAAGTGTATAGAACCTCATATCTCCGTT
AACAATGGGGATAGGAGGGG

Downstream 100 bases:

>100_bases
GTGAATAGATACTGAAAAAAGGACACGGAGGGGAATAATTTGGAAAAGATCATCGTCCGTGGCGGAAAGCGGTTAAACGG
CACAGTGCGTGTTGAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIASLEKNDAKVEKWSWLARETKTISNIHTFQKLLNDVKEKANI
QKWELEQSPDGYKATSYKKFSSYEERVVVTWSKENTKENTFIIFEVSGAKWDPKYIQKTNKIFSEKPIIYTCVQGVLNDK
IEGVLQNKTNQVLKDLSARAIEQIEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY

Sequences:

>Translated_236_residues
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIASLEKNDAKVEKWSWLARETKTISNIHTFQKLLNDVKEKANI
QKWELEQSPDGYKATSYKKFSSYEERVVVTWSKENTKENTFIIFEVSGAKWDPKYIQKTNKIFSEKPIIYTCVQGVLNDK
IEGVLQNKTNQVLKDLSARAIEQIEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY
>Mature_236_residues
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIASLEKNDAKVEKWSWLARETKTISNIHTFQKLLNDVKEKANI
QKWELEQSPDGYKATSYKKFSSYEERVVVTWSKENTKENTFIIFEVSGAKWDPKYIQKTNKIFSEKPIIYTCVQGVLNDK
IEGVLQNKTNQVLKDLSARAIEQIEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014794 [H]

Pfam domain/function: PF08680 DUF1779 [H]

EC number: NA

Molecular weight: Translated: 27209; Mature: 27209

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIASLEKNDAKVEKWSWLARETKT
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ISNIHTFQKLLNDVKEKANIQKWELEQSPDGYKATSYKKFSSYEERVVVTWSKENTKENT
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCE
FIIFEVSGAKWDPKYIQKTNKIFSEKPIIYTCVQGVLNDKIEGVLQNKTNQVLKDLSARA
EEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQIEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY
HHHHHHHHEEEEECCCCHHHHHHHCCCEEEEEEEEEEECCCCCEEEEECCEECCCC
>Mature Secondary Structure
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIASLEKNDAKVEKWSWLARETKT
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ISNIHTFQKLLNDVKEKANIQKWELEQSPDGYKATSYKKFSSYEERVVVTWSKENTKENT
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCE
FIIFEVSGAKWDPKYIQKTNKIFSEKPIIYTCVQGVLNDKIEGVLQNKTNQVLKDLSARA
EEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQIEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY
HHHHHHHHEEEEECCCCHHHHHHHCCCEEEEEEEEEEECCCCCEEEEECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]