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The map label for this gene is ydaJ [H]

Identifier: 49188056

GI number: 49188056

Start: 4945148

End: 4946242

Strand: Reverse

Name: ydaJ [H]

Synonym: BAS5070

Alternate gene names: 49188056

Gene position: 4946242-4945148 (Counterclockwise)

Preceding gene: 49188057

Following gene: 49188054

Centisome position: 94.6

GC content: 35.34

Gene sequence:

>1095_bases
GTGAAAAGTTTGCGGAAACGTATATATATAGTGATTGGAGTTATTCTTTTAATCGCTTTAGGTGGAATTGTATTTTGGTC
AGCTTTGCAAGGAAACCGTACGGAGCATTTTATTTTAAGACATATGATGAATGAAAATGGGATGCTTGCTACATATCGTT
TAGAAGATACAAAAGCAGGTACCGGTGAAGCGAAAGGCCGTGAAGCTTTATCGGAATCAGCAGGACTTTGGCTACAATAT
ACATTGGATAAAGATGATCAAGCGTTATTCGATGAACAAGTTAAGGTTATTCAAAATAACTTTGTACATAAGGACCAAAT
TGTTTTATGGAAAATCTCTGAAAAGGGAGAAATGCAATCAGCTACAAATGCACTTATTGACGATCTTCGTATTATAGAAC
AGTTATATCGCGCTTATGAAATGTACAAGGAAGAGCGTTATAAAAACTTGGCAGATCAATTGAGTGATGCTGTAATTCGT
TATAATAAGAAGGATAATTATTATGTTGATTATTATGATGCAGATGCAAGGAAACAAAATGATTTTGCAACAACGTCATA
TATAAATCCGCGCGCATTCTCTTATATGAAAAAGTATGGTAAAGTTTCTGCTCAGCAATATCAGGAAGTCGTTCAATTTT
TAGCAGATTACCCAAGGCATGGATGGGCATTCCCGAAAGAGTATAAAGAAGATGGTACATTTACGTACGATAAAGAAGTG
AATCTTATTGACCAATCATACGTTGCATATCACCGTAGTTTAGGTGGCCTTTCATCAGATGCTTATTTGGAATTTATAAA
GAAGAAGTTCCAGGAGGATGGAAAGTTATACGGTCGTTACAATTTAGAAACGGGAAAACAAACCGTGAAGTATGAATCAC
CAGCCGCTTACGGATTAACAATTTTGTACGTACTACAAACAGGTGATACAAAGTTTGCAAAGGAATTGTATGACCATATG
TCCACATTCCGAAATGACAACGTATTTAGTAGATATTACGGTGGATACGTAACAGGTGAAAATAATAATACGCATATTTT
CGATAACGTACTACCGCTTTTAGCTGAAATAGAATTAGAGAAAAGTGAACAATAG

Upstream 100 bases:

>100_bases
AACCCTTACGGACAGGAAAAAGGTGAGATTCCTTTTCGGTGGTTGGCATTTGACTTGGTTCGCCAACAATTTATAGATTT
TTATAAGAATTTCAAACCAG

Downstream 100 bases:

>100_bases
AAGGTGCCACCCTATCGGGATGGCATCTTTTATTTATTGATATCATTTTACGCCTTAATATTGGAGAAGTAATCTATCAC
GAATTCACGGAATTGCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKSLRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREALSESAGLWLQY
TLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIR
YNKKDNYYVDYYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEV
NLIDQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHM
STFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ

Sequences:

>Translated_364_residues
MKSLRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREALSESAGLWLQY
TLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIR
YNKKDNYYVDYYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEV
NLIDQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHM
STFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ
>Mature_364_residues
MKSLRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAGTGEAKGREALSESAGLWLQY
TLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIR
YNKKDNYYVDYYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEV
NLIDQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHM
STFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42404; Mature: 42404

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCC
TGEAKGREALSESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQS
CCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
ATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCC
DFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEV
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCC
NLIDQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLT
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCHHCEE
ILYVLQTGDTKFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELE
EEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHC
KSEQ
CCCC
>Mature Secondary Structure
MKSLRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGMLATYRLEDTKAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCC
TGEAKGREALSESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQS
CCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
ATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCC
DFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEV
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCC
NLIDQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLT
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCHHCEE
ILYVLQTGDTKFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELE
EEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHC
KSEQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]