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The map label for this gene is ydjC [C]

Identifier: 49188041

GI number: 49188041

Start: 4930731

End: 4931435

Strand: Reverse

Name: ydjC [C]

Synonym: BAS5055

Alternate gene names: 49188041

Gene position: 4931435-4930731 (Counterclockwise)

Preceding gene: 49188042

Following gene: 49188039

Centisome position: 94.32

GC content: 38.44

Gene sequence:

>705_bases
ATGATTAAATTAATTGTAAATGCAGATGATTTCGGTCTTACAGAAGGTACAAATTATGGCATTATTGATGGACATATAAA
TGGACTTGTAAATTCAACGACGATGATGATGAATATGCCAGGGACAGAGCATGCGGTACACTTAGCAAAAGAGTATAAAA
CGTTAGGGGTAGGAGTACATCTCGTATTAACGGCAGGGAAACCGCTTCTTGGAGATGTACCATCACTTGTAAGTAGCGAT
GGATTGTTTCATAAACAAAGCGTCGTATGGGAAGGGAAGGTAAATCCAGAGGAAGTTGAGAGAGAGTGGACTGCTCAAAT
TGAGAAATTCTTATCTTACGGATTAAAACCAACTCATTTAGATAGTCATCATCACGTGCATGGATTACCGATCTTGCACG
ATGTTTTGGAAAGATTAGCTGCTACATATAATGTTCCAATTCGTCGTTGTGAAGAAGAGCGAGCAGTGCGTCCATTTTCT
GACTTGTTTTACAGTGATTTTTATGCGGATGGTGTGACGGAAGATTATTTCGTAAAGTTAAAAGAAAGAGTACAAGGTGA
ACAAACGGTAGAAATTATGGTTCATCCAGCTTATATTGATCCAGAGCTTGTGAAGCGTTCTTCTTACGTAATGGATCGTG
TGAAAGAATTGCGTATTTTAACAGAGAGTGAGTTGCCTGAAGGAATAGAGCTTGTAAAGTTTTAA

Upstream 100 bases:

>100_bases
GAAGCGCATAAAGAATATCTTCCGCAGTTCTTCAAAAAGGTAGAGAAATAAAAGCGGCGCTATTTAGCCCGCTTTTTTTA
TTCTATTAGGAGGTATTACG

Downstream 100 bases:

>100_bases
TAGAAAAAAGACGGCTACATTATGCCGTCTTTTTTTATTTACAAAATGGATAGAACATATCCGCCAAAGGCTCCAAGTAT
AACGATAACCCAAGGTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIKLIVNADDFGLTEGTNYGIIDGHINGLVNSTTMMMNMPGTEHAVHLAKEYKTLGVGVHLVLTAGKPLLGDVPSLVSSD
GLFHKQSVVWEGKVNPEEVEREWTAQIEKFLSYGLKPTHLDSHHHVHGLPILHDVLERLAATYNVPIRRCEEERAVRPFS
DLFYSDFYADGVTEDYFVKLKERVQGEQTVEIMVHPAYIDPELVKRSSYVMDRVKELRILTESELPEGIELVKF

Sequences:

>Translated_234_residues
MIKLIVNADDFGLTEGTNYGIIDGHINGLVNSTTMMMNMPGTEHAVHLAKEYKTLGVGVHLVLTAGKPLLGDVPSLVSSD
GLFHKQSVVWEGKVNPEEVEREWTAQIEKFLSYGLKPTHLDSHHHVHGLPILHDVLERLAATYNVPIRRCEEERAVRPFS
DLFYSDFYADGVTEDYFVKLKERVQGEQTVEIMVHPAYIDPELVKRSSYVMDRVKELRILTESELPEGIELVKF
>Mature_234_residues
MIKLIVNADDFGLTEGTNYGIIDGHINGLVNSTTMMMNMPGTEHAVHLAKEYKTLGVGVHLVLTAGKPLLGDVPSLVSSD
GLFHKQSVVWEGKVNPEEVEREWTAQIEKFLSYGLKPTHLDSHHHVHGLPILHDVLERLAATYNVPIRRCEEERAVRPFS
DLFYSDFYADGVTEDYFVKLKERVQGEQTVEIMVHPAYIDPELVKRSSYVMDRVKELRILTESELPEGIELVKF

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=278, Percent_Identity=29.136690647482, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1788028, Length=237, Percent_Identity=38.3966244725738, Blast_Score=160, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 26483; Mature: 26483

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLIVNADDFGLTEGTNYGIIDGHINGLVNSTTMMMNMPGTEHAVHLAKEYKTLGVGVH
CEEEEEECCCCCCCCCCCCEEEECCCCCEECCEEEEEECCCCHHHHHHHHHHHHHCCCEE
LVLTAGKPLLGDVPSLVSSDGLFHKQSVVWEGKVNPEEVEREWTAQIEKFLSYGLKPTHL
EEEECCCCCCCCCHHHHCCCCCEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
DSHHHVHGLPILHDVLERLAATYNVPIRRCEEERAVRPFSDLFYSDFYADGVTEDYFVKL
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHH
KERVQGEQTVEIMVHPAYIDPELVKRSSYVMDRVKELRILTESELPEGIELVKF
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHECCC
>Mature Secondary Structure
MIKLIVNADDFGLTEGTNYGIIDGHINGLVNSTTMMMNMPGTEHAVHLAKEYKTLGVGVH
CEEEEEECCCCCCCCCCCCEEEECCCCCEECCEEEEEECCCCHHHHHHHHHHHHHCCCEE
LVLTAGKPLLGDVPSLVSSDGLFHKQSVVWEGKVNPEEVEREWTAQIEKFLSYGLKPTHL
EEEECCCCCCCCCHHHHCCCCCEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
DSHHHVHGLPILHDVLERLAATYNVPIRRCEEERAVRPFSDLFYSDFYADGVTEDYFVKL
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHH
KERVQGEQTVEIMVHPAYIDPELVKRSSYVMDRVKELRILTESELPEGIELVKF
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]