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The map label for this gene is 49188009

Identifier: 49188009

GI number: 49188009

Start: 4895010

End: 4895207

Strand: Reverse

Name: 49188009

Synonym: BAS5023

Alternate gene names: NA

Gene position: 4895207-4895010 (Counterclockwise)

Preceding gene: 49188010

Following gene: 49188008

Centisome position: 93.62

GC content: 37.37

Gene sequence:

>198_bases
ATGGGTGTAAAAAATAAAATTAAAGAATTAAGAAAGCAACATCATATAACGCAAGTTGAAATGGCAAAGGCGATGCAGGT
GACGCGGCAGACAATCGTGGCGATTGAAAACCATCATTACAACCCGAGTCTAGAGTTATCCTTAAAAATCGCCAAATATT
TTGGAGTGAAGGTGGAAGAAATATTTACGCTAGAGTAA

Upstream 100 bases:

>100_bases
AGTGAAATGTTTTTCTAAAATTTGTAAAGATATCTTTACTTACAACTGGAAAATATTTATAATTTAAGTAAAGATATCTT
TACTTTTGAAGGTGGAGCCT

Downstream 100 bases:

>100_bases
GGGGAGAGAAAAATGCAGGATGAGTTTGAGAGATTTCAGTCAGATAAAGCGTTTAAATATGTAGGGTTATTTTTCGCGAT
TAGTTTAGCTGTGTGGAGTT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE

Sequences:

>Translated_65_residues
MGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE
>Mature_64_residues
GVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7591; Mature: 7460

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEE
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCEEHH
IFTLE
EEECC
>Mature Secondary Structure 
GVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEE
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCEEHH
IFTLE
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]