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The map label for this gene is whiA [H]

Identifier: 49187988

GI number: 49187988

Start: 4874166

End: 4875116

Strand: Reverse

Name: whiA [H]

Synonym: BAS5002

Alternate gene names: 49187988

Gene position: 4875116-4874166 (Counterclockwise)

Preceding gene: 49187989

Following gene: 49187987

Centisome position: 93.24

GC content: 35.23

Gene sequence:

>951_bases
GTGTCATTTGCATCAGAAACAAAGAAAGAGTTGACGAATCTAGAGATGAAGGAATGCTGTGAGAAAGCAGAATTATCAGC
GTTGCTTCGCATGAACGGATCACTTTCTTTTTCAAACCGTCGTCTATCAATCGATATTCAAACGGAAAATGCGGCAATTG
CAAGAAGGATTTATACGCTTTTGAAAAAAGGATATGACGTGACGGTAGAATTACTTGTTCGTAAAAAAATGCGATTGAAG
AAAAATAATGTATATATCGTAAGGCTTGTTGAGAAGTCTCGCGAAATATTAGCTGATCTTCATATCGTACGAGATGACTT
TTCATTTATTCGAAATATATCACAAGAATTAATTGAGAAGAAATGTTGTAAACGATCGTATTTACGCGGTGCATTTTTAG
CAGGTGGTTCAGTAAATAACCCAGAAACATCATCTTATCATTTAGAGATCTTTTCGTTATATAAGGAACATAATGATGCT
ATATGTGAACTGATGAACGGATTTGATTTAAATAGTAAGACGTTGGAAAGAAGAAAAGGGTACATTACGTATTTGAAAGA
AGCAGAAAAGATTACAGAGTTTTTAAATATTATAGGTGCACATAATGCACTTTTGAGATTTGAAGACATTCGAATCGTAC
GTGATATGCGTAATTCTGTAAATCGTTTAGTGAATTGCGAAACAGCTAATTTAAATAAAACAATTGGTGCAGCGCTAAGG
CAGATTGAAAATATCCGCTATATTGATGAGACGGTTGGTCTTGATATATTGCCGGATAAACTACGCGAAATTGCGCAACT
ACGAAGAGATTATCAAGATGTAACATTGAAAGAGTTAGGTGAGATGGTATCCGGGGGGAAAATTAGTAAATCGGGTATTA
ATCATCGTTTGCGTAAAATCGATGATATTGCAGAGAAATTACGCGCGGGGGAAACGGTAGCAAAAAAATAA

Upstream 100 bases:

>100_bases
CACTGTTGTAGATGTGCGTTATCTCGTTTGAGGTAACGCTCCTCATTTCATATAGGACAAGATTTTTGTTCCACAATAAT
CGTATAAGGAGGTGTTGGCT

Downstream 100 bases:

>100_bases
GAGGTTAAAGGGGAAATGGAGCTGTGGTTCAAAAAAGAGTTCAGGTTTCATTAAAAAACGGTTTACAAGCACGTCCGGCT
GCGTTGTTTGTACAAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLK
KNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDA
ICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
QIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK

Sequences:

>Translated_316_residues
MSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLK
KNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDA
ICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
QIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK
>Mature_315_residues
SFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLKK
NNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAI
CELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQ
IENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 36367; Mature: 36235

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHH
LKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEK
HHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTLERRKG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
YITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH
DDIAEKLRAGETVAKK
HHHHHHHHCCCHHCCC
>Mature Secondary Structure 
SFASETKKELTNLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTL
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHH
LKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEK
HHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTLERRKG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
YITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH
DDIAEKLRAGETVAKK
HHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA