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The map label for this gene is rihA [H]

Identifier: 49187948

GI number: 49187948

Start: 4842047

End: 4842997

Strand: Direct

Name: rihA [H]

Synonym: BAS4961

Alternate gene names: 49187948

Gene position: 4842047-4842997 (Clockwise)

Preceding gene: 49187936

Following gene: 49187955

Centisome position: 92.61

GC content: 37.96

Gene sequence:

>951_bases
ATGCCCAAAAAAGTTCTTATTTTTTGTGATCCTGGGATTGATGATACGATGGCTCTCCTCTTAGCATTCTTTATCGATGA
AATAGAAATCATCGGCATCGTTGCTGATTACGGCAATGTTCCAAAGAAGATGGCCGTACAAAATGCTCATTTCCTTAAGA
ATGAAACAAGGAATAGAAATATTAAGATATTCGGTGGTTCAGAACGCCCTCTTACTGGTGCCCCGCCTGCTTTTTTTACA
GAAGTACACGGGAAACAAGGGCTTGGGCCAATTATTCCAAATGGGAATGTGACTAACGGAGAAATGGAGAATTTCTTTGA
AGTCATTCCTCTTATTGAACAGTATAAAGATGAATTAATCATTGTAAGTTTAGGAAGACTTACCTCTCTAGCAATTTTAT
TTATTATGTGCAAACAGCTAATGAAACAAATTAAATCTTATTACGTAATGGGCGGTGCCTTTTTACATCCTGGTAACGTT
ACCCCTATTTCCGAAGCTAACTTTTATGGCGACCCTACTGCTGCTAACATTGTTCTTCAATCCGCAGCTAACATGTACAT
ATACCCGTTAAACGTTACCCAATACTCCGTCATTACACCAGAAATGGCCGAGTACATTGAAGCAAAAGGAAAAGTCCCAC
TCGTCAAACCATTATTCGATCATTATTACTATGGATATTATAAAAATGCCCTGCCAGATTTAAAAGGTAGCCCCTTCCAT
GACACAATGCCAATACTCGCTTTACTTGATAACTCTATGTTTACGTATCACAAATCACCTATCGTTGTCATGGCAGAATC
TTATGCACAAGGAGCAAGCATTGGAGAATTTCGTTCCTTAGGAAAACCTAAACCATTTATGGATTGGCCGAGTCATCAAA
TCGCAATTGATTTTGATTATAACCGTTTCTTTAAACATTTCATGTCACTTATGACAGGTGAGCAATTTTAA

Upstream 100 bases:

>100_bases
AGAAGTTTTTATTTTCTGAATTTTAAAGGTTGTTATTTCAATAAAATAATCTTTTTATTCTTAAGCTTACATATATATAA
AGAAGATAGGTGGTGAACAT

Downstream 100 bases:

>100_bases
CATAAAAAAAACAGACCGTGATTTCTCACGGTCTGTCGTTATTTTCTACAATTATCGTTTGATGTTGTAGAAAGATTTGA
TACCATCGTAAACAGCGATT

Product: inosine-uridine preferring nucleoside hydrolase family protein

Products: D-ribose; purine

Alternate protein names: Cytidine/uridine-specific hydrolase [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MPKKVLIFCDPGIDDTMALLLAFFIDEIEIIGIVADYGNVPKKMAVQNAHFLKNETRNRNIKIFGGSERPLTGAPPAFFT
EVHGKQGLGPIIPNGNVTNGEMENFFEVIPLIEQYKDELIIVSLGRLTSLAILFIMCKQLMKQIKSYYVMGGAFLHPGNV
TPISEANFYGDPTAANIVLQSAANMYIYPLNVTQYSVITPEMAEYIEAKGKVPLVKPLFDHYYYGYYKNALPDLKGSPFH
DTMPILALLDNSMFTYHKSPIVVMAESYAQGASIGEFRSLGKPKPFMDWPSHQIAIDFDYNRFFKHFMSLMTGEQF

Sequences:

>Translated_316_residues
MPKKVLIFCDPGIDDTMALLLAFFIDEIEIIGIVADYGNVPKKMAVQNAHFLKNETRNRNIKIFGGSERPLTGAPPAFFT
EVHGKQGLGPIIPNGNVTNGEMENFFEVIPLIEQYKDELIIVSLGRLTSLAILFIMCKQLMKQIKSYYVMGGAFLHPGNV
TPISEANFYGDPTAANIVLQSAANMYIYPLNVTQYSVITPEMAEYIEAKGKVPLVKPLFDHYYYGYYKNALPDLKGSPFH
DTMPILALLDNSMFTYHKSPIVVMAESYAQGASIGEFRSLGKPKPFMDWPSHQIAIDFDYNRFFKHFMSLMTGEQF
>Mature_315_residues
PKKVLIFCDPGIDDTMALLLAFFIDEIEIIGIVADYGNVPKKMAVQNAHFLKNETRNRNIKIFGGSERPLTGAPPAFFTE
VHGKQGLGPIIPNGNVTNGEMENFFEVIPLIEQYKDELIIVSLGRLTSLAILFIMCKQLMKQIKSYYVMGGAFLHPGNVT
PISEANFYGDPTAANIVLQSAANMYIYPLNVTQYSVITPEMAEYIEAKGKVPLVKPLFDHYYYGYYKNALPDLKGSPFHD
TMPILALLDNSMFTYHKSPIVVMAESYAQGASIGEFRSLGKPKPFMDWPSHQIAIDFDYNRFFKHFMSLMTGEQF

Specific function: Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively [H]

COG id: COG1957

COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IUNH family. RihA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786871, Length=307, Percent_Identity=28.9902280130293, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788486, Length=307, Percent_Identity=24.1042345276873, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786213, Length=302, Percent_Identity=27.1523178807947, Blast_Score=81, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI32565474, Length=188, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6320608, Length=258, Percent_Identity=28.2945736434109, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015910
- InterPro:   IPR023186
- InterPro:   IPR001910
- InterPro:   IPR022975 [H]

Pfam domain/function: PF01156 IU_nuc_hydro [H]

EC number: 3.2.2.1

Molecular weight: Translated: 35542; Mature: 35411

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKVLIFCDPGIDDTMALLLAFFIDEIEIIGIVADYGNVPKKMAVQNAHFLKNETRNRN
CCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
IKIFGGSERPLTGAPPAFFTEVHGKQGLGPIIPNGNVTNGEMENFFEVIPLIEQYKDELI
EEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEE
IVSLGRLTSLAILFIMCKQLMKQIKSYYVMGGAFLHPGNVTPISEANFYGDPTAANIVLQ
EEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHC
SAANMYIYPLNVTQYSVITPEMAEYIEAKGKVPLVKPLFDHYYYGYYKNALPDLKGSPFH
CCCCEEEEEECCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
DTMPILALLDNSMFTYHKSPIVVMAESYAQGASIGEFRSLGKPKPFMDWPSHQIAIDFDY
HHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECH
NRFFKHFMSLMTGEQF
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKKVLIFCDPGIDDTMALLLAFFIDEIEIIGIVADYGNVPKKMAVQNAHFLKNETRNRN
CCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
IKIFGGSERPLTGAPPAFFTEVHGKQGLGPIIPNGNVTNGEMENFFEVIPLIEQYKDELI
EEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEE
IVSLGRLTSLAILFIMCKQLMKQIKSYYVMGGAFLHPGNVTPISEANFYGDPTAANIVLQ
EEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHC
SAANMYIYPLNVTQYSVITPEMAEYIEAKGKVPLVKPLFDHYYYGYYKNALPDLKGSPFH
CCCCEEEEEECCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
DTMPILALLDNSMFTYHKSPIVVMAESYAQGASIGEFRSLGKPKPFMDWPSHQIAIDFDY
HHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECH
NRFFKHFMSLMTGEQF
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-D-ribosylpurine; H2O

Specific reaction: an N-D-ribosylpurine + H2O = D-ribose + a purine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA