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The map label for this gene is 49187935

Identifier: 49187935

GI number: 49187935

Start: 4827771

End: 4828733

Strand: Reverse

Name: 49187935

Synonym: BAS4947

Alternate gene names: NA

Gene position: 4828733-4827771 (Counterclockwise)

Preceding gene: 49187937

Following gene: 49187934

Centisome position: 92.35

GC content: 34.48

Gene sequence:

>963_bases
ATGATTGTAAAAGAACGGAAAATGTCCGTACATTTGCTTCAATTAGAAGCTTTACTTAGAAGATTGCCTGCTCATCATCC
AAAAAAGAATGTGGTGGTTGAAAGTCTAGCGAAATTTATGGCTGGCTATAAAGGAGAGCAGGCAATTGAATATCCGCTTA
GTTTTCTATCCGAAACAAAATATAGCATTTTACATGACATCAGATTGTTTGATCAGAAACATTATTTCCAAATTGATGCC
CTCATAGTTTCCTCATATTTTCTTCTTTTTCTTGAAATAAAAAATATCATTGGTACGTTAATTTTTGATGCAAAGTTTAA
TCAACTCATTCGAATCGCAGATGGTACTTCAGAAGAGGGTTTTCCAGATCCGCTTTTACAAGTGAAACGGCAAGAGATGC
AGCTGAGAAAATGGCTGAGTTTGCATGGTTTATATAATATTCCGATTGAATCTCTCGTTGTAATTAGTTCTCCTCGTACA
ATTATTAAAACTTCAGATGAAATGCTTCCTAATAAAATTATCCACGGTGCAAATTTACCTAATAGAATCAAACAAATGGA
AAGTCAATATAAAGAAGGCGTAATTGATAATGTAGATGGACTTATAAATCAAATTATGAATGAGCACATTCCGCAGCGAC
AAAATATTCTTGCACAATATAAAGTGAAAAAAGAGGAATTGCTAAAGGGCGTGCAGTGTGAGGAATGTTTTACAATGGCA
ATGTTAAAAGAAAAACAGGGATGGCGTTGCTCAAACTGTAATAGTACGTCTAAAAGTGCTCATTTACGTGCTTTACAAGA
CTACACACTTCTGTTTGGAACGATAACTACTAATAGTAAATTGAGGGACTTTCTTAATGTGCAGTCTAGTTCTGCGGTTA
AAAGACTCCTCAAAACAATGAACATCCCACACACCGGCACTAATAAAGGGAGAAAATATGATTTAACTTCTTTCCAATTA
TAA

Upstream 100 bases:

>100_bases
TAAATTGGGTTGCGCTGATATATTTCGAAAATCGCCGATATAATTGGAGTTGCGCTGATATATTTGAAAAATCGCTGATA
TATTTTGGAGGGGAATAAAG

Downstream 100 bases:

>100_bases
TTTTGCTATAATAAATACGTACTTATACGAAGGGGAGTTTAATGAGAAAATGAAATCATTCAATATTGATCATTTTATCG
CGAGTGTTTTACAGTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NERD Domain-Containing Protein; Nerd Domain-Containing Protein; NERD Domain Protein

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIVKERKMSVHLLQLEALLRRLPAHHPKKNVVVESLAKFMAGYKGEQAIEYPLSFLSETKYSILHDIRLFDQKHYFQIDA
LIVSSYFLLFLEIKNIIGTLIFDAKFNQLIRIADGTSEEGFPDPLLQVKRQEMQLRKWLSLHGLYNIPIESLVVISSPRT
IIKTSDEMLPNKIIHGANLPNRIKQMESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMA
MLKEKQGWRCSNCNSTSKSAHLRALQDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHTGTNKGRKYDLTSFQL

Sequences:

>Translated_320_residues
MIVKERKMSVHLLQLEALLRRLPAHHPKKNVVVESLAKFMAGYKGEQAIEYPLSFLSETKYSILHDIRLFDQKHYFQIDA
LIVSSYFLLFLEIKNIIGTLIFDAKFNQLIRIADGTSEEGFPDPLLQVKRQEMQLRKWLSLHGLYNIPIESLVVISSPRT
IIKTSDEMLPNKIIHGANLPNRIKQMESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMA
MLKEKQGWRCSNCNSTSKSAHLRALQDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHTGTNKGRKYDLTSFQL
>Mature_320_residues
MIVKERKMSVHLLQLEALLRRLPAHHPKKNVVVESLAKFMAGYKGEQAIEYPLSFLSETKYSILHDIRLFDQKHYFQIDA
LIVSSYFLLFLEIKNIIGTLIFDAKFNQLIRIADGTSEEGFPDPLLQVKRQEMQLRKWLSLHGLYNIPIESLVVISSPRT
IIKTSDEMLPNKIIHGANLPNRIKQMESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMA
MLKEKQGWRCSNCNSTSKSAHLRALQDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTMNIPHTGTNKGRKYDLTSFQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36865; Mature: 36865

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKERKMSVHLLQLEALLRRLPAHHPKKNVVVESLAKFMAGYKGEQAIEYPLSFLSETK
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YSILHDIRLFDQKHYFQIDALIVSSYFLLFLEIKNIIGTLIFDAKFNQLIRIADGTSEEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
FPDPLLQVKRQEMQLRKWLSLHGLYNIPIESLVVISSPRTIIKTSDEMLPNKIIHGANLP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCHHHHCCHHHHHHHHHCCCCCH
NRIKQMESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHH
MLKEKQGWRCSNCNSTSKSAHLRALQDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTM
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCHHHHHHHHHHC
NIPHTGTNKGRKYDLTSFQL
CCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MIVKERKMSVHLLQLEALLRRLPAHHPKKNVVVESLAKFMAGYKGEQAIEYPLSFLSETK
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YSILHDIRLFDQKHYFQIDALIVSSYFLLFLEIKNIIGTLIFDAKFNQLIRIADGTSEEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
FPDPLLQVKRQEMQLRKWLSLHGLYNIPIESLVVISSPRTIIKTSDEMLPNKIIHGANLP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCHHHHCCHHHHHHHHHCCCCCH
NRIKQMESQYKEGVIDNVDGLINQIMNEHIPQRQNILAQYKVKKEELLKGVQCEECFTMA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHH
MLKEKQGWRCSNCNSTSKSAHLRALQDYTLLFGTITTNSKLRDFLNVQSSSAVKRLLKTM
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCHHHHHHHHHHC
NIPHTGTNKGRKYDLTSFQL
CCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA