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The map label for this gene is tsr [C]

Identifier: 49187893

GI number: 49187893

Start: 4786962

End: 4788653

Strand: Direct

Name: tsr [C]

Synonym: BAS4905

Alternate gene names: 49187893

Gene position: 4786962-4788653 (Clockwise)

Preceding gene: 49187892

Following gene: 49187894

Centisome position: 91.55

GC content: 37.59

Gene sequence:

>1692_bases
ATGAAATATGTTAGTATTCGAAAAAAACTACTGTTCACACTCTTAAGCATTTCTTCTTTATTTAGCATTGCTCTTATTGT
TATTCTTTCATTCGCTATGAGCCAAGCGAGCGAAATTGAAACGTTAAAAAATGATGTTTCCAAAAGAGCAACCATTTTAA
AAGAACGTGGCGATTGGTTCCAAGCACAAGTTGCTGGTTTACAAGAATATTTACTATCACATGATCAAAAAGGATTAGAT
AAATTCAACCGTGAAGGAAAAAAACTAGCTGATACGAGAGAAAAAGTAACAAGTGATAAAAAACTCCCAGAAGGAATGAA
AGAAGCGATTCTAATGGGGGGTAAATGGCGGAGCGTCATAGATAATGAAGTTCTCCCTCTCGCTCGCGAAGGAAAATGGG
ACGAAGCATCTAAAATTGCTTTAGCACAAACCGATTACGTAAACGATCTTTTAAGTCGTTTTACGAAATATGCAAATGAA
GAAAATGATAAACGTGACGCATTAATTGCTGACGTGGAGTCTTCTTCATCCCTTATTCAATATATTATCTTCTTCTCACT
CATTACATGTACAGTAACGTCTATTTTATTAGCATGGTGGTTCTCTGGTAAACTCGTTAAACCGATACAACAAATTGATG
AGAAATTAAAAGAATTAGCTTCGCAAGATGGTGATTTAACTGCTAGATTGCACGTAACGAGTAAAGATGAAATTGGTGAT
ATCGCCAATTCCTTTAATCAAATGCTCGCTAATTTACAGCGTATCATAAAACAAGTGCAACAAACATCAACAAGTGTAAA
AGAAGCATCTGAAAATGTGTTTATCGAAACAACTGCTTCTATGGAAAACACCGCAAAAACCGAAGAGACCATGAATGCTC
TTGAGCATAATATTCGTTCACAAGTTTCCAGCATCGAAGAAAGTTCAACTGCAATGGACGATATGGCAGTAAGTGTTCAG
CGCATTGCTGAATCTGCCACATCTGTAACTGAACTTGCTGTAGCTACATCCGAACAAGCTAACGACGGAAGTACTGTTAT
TCAAAAATCCGTTTCACAAATGACAACGATACACGACGCTGTAAATGCTACGTCAGAAGTGGTCGAACGTCTAATCACTC
ACACGAAATATATTGATACAGCTGTACAATCTATTTCTAATATCGCGGAACAAACAAACTTACTTGCTTTAAATGCATCT
ATTGAAGCAGCTCGTGCTGGCGAACAAGGGAAAGGTTTCGCTGTCGTAGCTGATGAAGTTCGAAAACTTGCTGAACAATC
TAAAACTGCGGCAACAGATATTAACCAATTACTACATCAAATTCAACAAGACACTGAAACTGCGAGCTCTATGATGTCAC
AAGGTCGTTCTGAGGCATTTGAAGGCATTCATGTCATTCGCGAAGCTGGCAATTCTTTCACAACAATTGTAGAGCAAGTA
AATAAAGTATCTACTCAAATGCAAGACATCTCAGCAACTGCTGAAGAAATGGCTGCAAGTGCTGAAGAAATGAACGCTTC
ACTGAATAACATCGCTTCTATTTCGACTGAAGTATCTAGTGAAACAGCGGCAACAGCACAATCTGCTGAGAAAAAAGTTG
TTACGATGAATGAGATGACACAAACAGCTAAACAAATGAAACAAACAGTTGAAGAATTAGATCAACTCGTATCACACTTC
AAAACTGAATAG

Upstream 100 bases:

>100_bases
TTTATTGAACAGATTAATAACTTCATAATGATGTTTTTATTAATTCTGCTCTAAATATTTATAAATTATAATAAATAGTT
TTTAAAAGGCAGGGGTAACG

Downstream 100 bases:

>100_bases
CCTTTAAAAAATATCCCTCTTCCAAAAGGGATATTTTTTTGAGCTCATTCCCTGCATATTATACACATTTCCGTTATAAT
GAGAATCGATATCATTAAAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWFQAQVAGLQEYLLSHDQKGLD
KFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVIDNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANE
ENDKRDALIADVESSSSLIQYIIFFSLITCTVTSILLAWWFSGKLVKPIQQIDEKLKELASQDGDLTARLHVTSKDEIGD
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRSQVSSIEESSTAMDDMAVSVQ
RIAESATSVTELAVATSEQANDGSTVIQKSVSQMTTIHDAVNATSEVVERLITHTKYIDTAVQSISNIAEQTNLLALNAS
IEAARAGEQGKGFAVVADEVRKLAEQSKTAATDINQLLHQIQQDTETASSMMSQGRSEAFEGIHVIREAGNSFTTIVEQV
NKVSTQMQDISATAEEMAASAEEMNASLNNIASISTEVSSETAATAQSAEKKVVTMNEMTQTAKQMKQTVEELDQLVSHF
KTE

Sequences:

>Translated_563_residues
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWFQAQVAGLQEYLLSHDQKGLD
KFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVIDNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANE
ENDKRDALIADVESSSSLIQYIIFFSLITCTVTSILLAWWFSGKLVKPIQQIDEKLKELASQDGDLTARLHVTSKDEIGD
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRSQVSSIEESSTAMDDMAVSVQ
RIAESATSVTELAVATSEQANDGSTVIQKSVSQMTTIHDAVNATSEVVERLITHTKYIDTAVQSISNIAEQTNLLALNAS
IEAARAGEQGKGFAVVADEVRKLAEQSKTAATDINQLLHQIQQDTETASSMMSQGRSEAFEGIHVIREAGNSFTTIVEQV
NKVSTQMQDISATAEEMAASAEEMNASLNNIASISTEVSSETAATAQSAEKKVVTMNEMTQTAKQMKQTVEELDQLVSHF
KTE
>Mature_563_residues
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWFQAQVAGLQEYLLSHDQKGLD
KFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVIDNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANE
ENDKRDALIADVESSSSLIQYIIFFSLITCTVTSILLAWWFSGKLVKPIQQIDEKLKELASQDGDLTARLHVTSKDEIGD
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRSQVSSIEESSTAMDDMAVSVQ
RIAESATSVTELAVATSEQANDGSTVIQKSVSQMTTIHDAVNATSEVVERLITHTKYIDTAVQSISNIAEQTNLLALNAS
IEAARAGEQGKGFAVVADEVRKLAEQSKTAATDINQLLHQIQQDTETASSMMSQGRSEAFEGIHVIREAGNSFTTIVEQV
NKVSTQMQDISATAEEMAASAEEMNASLNNIASISTEVSSETAATAQSAEKKVVTMNEMTQTAKQMKQTVEELDQLVSHF
KTE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=354, Percent_Identity=29.3785310734463, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1787690, Length=349, Percent_Identity=28.3667621776504, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788195, Length=303, Percent_Identity=30.3630363036304, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=28.7461773700306, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1788194, Length=353, Percent_Identity=27.7620396600567, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 61968; Mature: 61968

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QAQVAGLQEYLLSHDQKGLDKFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVI
HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
DNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANEENDKRDALIADVESSSSLIQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHH
YIIFFSLITCTVTSILLAWWFSGKLVKPIQQIDEKLKELASQDGDLTARLHVTSKDEIGD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
QVSSIEESSTAMDDMAVSVQRIAESATSVTELAVATSEQANDGSTVIQKSVSQMTTIHDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VNATSEVVERLITHTKYIDTAVQSISNIAEQTNLLALNASIEAARAGEQGKGFAVVADEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHH
RKLAEQSKTAATDINQLLHQIQQDTETASSMMSQGRSEAFEGIHVIREAGNSFTTIVEQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH
NKVSTQMQDISATAEEMAASAEEMNASLNNIASISTEVSSETAATAQSAEKKVVTMNEMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTAKQMKQTVEELDQLVSHFKTE
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QAQVAGLQEYLLSHDQKGLDKFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVI
HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
DNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANEENDKRDALIADVESSSSLIQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHH
YIIFFSLITCTVTSILLAWWFSGKLVKPIQQIDEKLKELASQDGDLTARLHVTSKDEIGD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
QVSSIEESSTAMDDMAVSVQRIAESATSVTELAVATSEQANDGSTVIQKSVSQMTTIHDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VNATSEVVERLITHTKYIDTAVQSISNIAEQTNLLALNASIEAARAGEQGKGFAVVADEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHH
RKLAEQSKTAATDINQLLHQIQQDTETASSMMSQGRSEAFEGIHVIREAGNSFTTIVEQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH
NKVSTQMQDISATAEEMAASAEEMNASLNNIASISTEVSSETAATAQSAEKKVVTMNEMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTAKQMKQTVEELDQLVSHFKTE
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA