Click here to switch to the map view.

The map label for this gene is 49187828

Identifier: 49187828

GI number: 49187828

Start: 4723578

End: 4724180

Strand: Reverse

Name: 49187828

Synonym: BAS4838

Alternate gene names: NA

Gene position: 4724180-4723578 (Counterclockwise)

Preceding gene: 49187830

Following gene: 49187826

Centisome position: 90.35

GC content: 33.17

Gene sequence:

>603_bases
ATGTCGTATGACAATAATTTTTTTCATAATTCATCCCCATCTTTCAAGTTGACGCTATATACTTCGACAAATGTGGAAAA
TATTCCTTTTTATTGGAAAGAACATAATGATCCGATCATGTGGAAAAGTAATGTGGATAATAGAAAATCGAGGTGCAATG
ATGAAAAAATGATATGTATTGTATTCATGATTTGTTTTCTCTCGCAAATGTCCACAACATATGCACAATCCAATCAAAAG
GTAGATTATCCAAGCAATCGAAATAAGTCATTTGTGAGTGAGGATGTGTTTTACGAACAATTAGATAAGAAAATTTATAA
AGAATACAACAATGCAGCATATAGCGTTCGAAAAAAAATCTCATTTAAAGAAGTGCCCGATGAAGAATTTTCTTTCCTAG
AAAAAACAGCCGCAGGTTGCCGGAGTGAAGTGGTGCTTCAAGATTTTTTCGTTCACCCTGATCGCCAAGTATACTTTTTT
GCTTCCTTTACTCAAAATGAAATAGAAGAGTTACATAAGTACATTGTTATAGATGCAGAAACAAAGAGGGAGCTGCAAAG
CGGGAAAAGCTATCATCACTATGATAATTCGTATAAAAAATAA

Upstream 100 bases:

>100_bases
TTTGTGGATGGTGCTCTAAGAGGAATGTAGCAAGGGTGTTTGCTTGTTTTTTTCCATCGGTCGTTAATTCGGCATCACGT
TCTTGGCCAGTTGCTGAACA

Downstream 100 bases:

>100_bases
CCCACCAATTGGCGGGTTATTTTTATTCTGGCACACTCATTAATTTCTCTTTCATTTTACGAATAAGAACAACAGCACCA
ATGGTAAAGAGAAGGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSYDNNFFHNSSPSFKLTLYTSTNVENIPFYWKEHNDPIMWKSNVDNRKSRCNDEKMICIVFMICFLSQMSTTYAQSNQK
VDYPSNRNKSFVSEDVFYEQLDKKIYKEYNNAAYSVRKKISFKEVPDEEFSFLEKTAAGCRSEVVLQDFFVHPDRQVYFF
ASFTQNEIEELHKYIVIDAETKRELQSGKSYHHYDNSYKK

Sequences:

>Translated_200_residues
MSYDNNFFHNSSPSFKLTLYTSTNVENIPFYWKEHNDPIMWKSNVDNRKSRCNDEKMICIVFMICFLSQMSTTYAQSNQK
VDYPSNRNKSFVSEDVFYEQLDKKIYKEYNNAAYSVRKKISFKEVPDEEFSFLEKTAAGCRSEVVLQDFFVHPDRQVYFF
ASFTQNEIEELHKYIVIDAETKRELQSGKSYHHYDNSYKK
>Mature_199_residues
SYDNNFFHNSSPSFKLTLYTSTNVENIPFYWKEHNDPIMWKSNVDNRKSRCNDEKMICIVFMICFLSQMSTTYAQSNQKV
DYPSNRNKSFVSEDVFYEQLDKKIYKEYNNAAYSVRKKISFKEVPDEEFSFLEKTAAGCRSEVVLQDFFVHPDRQVYFFA
SFTQNEIEELHKYIVIDAETKRELQSGKSYHHYDNSYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23905; Mature: 23774

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYDNNFFHNSSPSFKLTLYTSTNVENIPFYWKEHNDPIMWKSNVDNRKSRCNDEKMICI
CCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCHHHHCCCCHHHHH
VFMICFLSQMSTTYAQSNQKVDYPSNRNKSFVSEDVFYEQLDKKIYKEYNNAAYSVRKKI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SFKEVPDEEFSFLEKTAAGCRSEVVLQDFFVHPDRQVYFFASFTQNEIEELHKYIVIDAE
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHEEEEECH
TKRELQSGKSYHHYDNSYKK
HHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYDNNFFHNSSPSFKLTLYTSTNVENIPFYWKEHNDPIMWKSNVDNRKSRCNDEKMICI
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCHHHHCCCCHHHHH
VFMICFLSQMSTTYAQSNQKVDYPSNRNKSFVSEDVFYEQLDKKIYKEYNNAAYSVRKKI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SFKEVPDEEFSFLEKTAAGCRSEVVLQDFFVHPDRQVYFFASFTQNEIEELHKYIVIDAE
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHEEEEECH
TKRELQSGKSYHHYDNSYKK
HHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA