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The map label for this gene is 49187818

Identifier: 49187818

GI number: 49187818

Start: 4717426

End: 4718058

Strand: Reverse

Name: 49187818

Synonym: BAS4828

Alternate gene names: NA

Gene position: 4718058-4717426 (Counterclockwise)

Preceding gene: 49187819

Following gene: 49187817

Centisome position: 90.23

GC content: 37.91

Gene sequence:

>633_bases
ATGGGGGAAGCACGGACGACGAAAGATGAAATTATCCAATTGTTGAAAGTAAAGGGAGAGCACACGGTAGCGGAACTAGC
TGAAATTTTAGAGATTACAGAAATGGCGATTCGAAGACATTTAAGTAATCTTGAGAAAGATGGTTTCATCTATTCTAAGA
TGGTAAGGCAACATGTCGGAAGACCAACTTATTTGTATGGATTAAGCGAAAAGGGAGAAGATACATTCCCGAAAGAGTAT
AAGCAATTTGCGATTGATATGCTAGAAGATTTAGCTCGAATGGGCGATGAACAAATACTTCGTTACGTTTTAAAAGAGAG
AACGAAGCGAATGGAAGAACAGCTGCAAAAGCGAGTGAGTAATCAAAAGAATTTAGCATATAAAGTGCAAGAGATAGCGG
CGATGCAAGAGAAAAATGGTTATATGGTTCAAATTAAGAGAGACGGAGAGAACTCTTTCGTAATTGAAAAACAAAACTGT
CCGTTAAAGGAAATTGCAGAGAGATTCCCGCAAGTATGTGAAGATGAAAAAGAGATGTATAATCGTTTATTTGCAGGAGC
AGATGTAAAGACGCTAGCAAACATGTGCGAGGGCGATTGTAGTTGTTCTTATCAAGTAAAAGAGAAAAAATGA

Upstream 100 bases:

>100_bases
GACCTGTATCTGCATTTGTACCAGAATAATTATGCTTATAAGATCCCCAGAGAAAGCCTTTTGGGGGTCTTATATTGTAT
GTGAGGGAGAAGGGTGAAGC

Downstream 100 bases:

>100_bases
ACGTTATGGGGCGCTTTAAGGTAAAGCGTTTTTTTCTTTGTAAAAAGCGGGTAATATAAGAGTGGTATGATAAGGTGAGA
ACGTTAGGATAGAAGGAGAG

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Regulatory Protein ArsR; DeoR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator ArsR Family; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; ArsR Transcriptional Regulator; MarR Family Transcriptional Regulator; SufR Family Transcriptional Regulator; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator DeoR Family; Arsr Family Transcriptional Regulator; Transcription Regulator; ArsR Family Regulator; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; ParR Family Transcriptional Regulator; Transcriptional Regulator Protein-Like Protein

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MGEARTTKDEIIQLLKVKGEHTVAELAEILEITEMAIRRHLSNLEKDGFIYSKMVRQHVGRPTYLYGLSEKGEDTFPKEY
KQFAIDMLEDLARMGDEQILRYVLKERTKRMEEQLQKRVSNQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNC
PLKEIAERFPQVCEDEKEMYNRLFAGADVKTLANMCEGDCSCSYQVKEKK

Sequences:

>Translated_210_residues
MGEARTTKDEIIQLLKVKGEHTVAELAEILEITEMAIRRHLSNLEKDGFIYSKMVRQHVGRPTYLYGLSEKGEDTFPKEY
KQFAIDMLEDLARMGDEQILRYVLKERTKRMEEQLQKRVSNQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNC
PLKEIAERFPQVCEDEKEMYNRLFAGADVKTLANMCEGDCSCSYQVKEKK
>Mature_209_residues
GEARTTKDEIIQLLKVKGEHTVAELAEILEITEMAIRRHLSNLEKDGFIYSKMVRQHVGRPTYLYGLSEKGEDTFPKEYK
QFAIDMLEDLARMGDEQILRYVLKERTKRMEEQLQKRVSNQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNCP
LKEIAERFPQVCEDEKEMYNRLFAGADVKTLANMCEGDCSCSYQVKEKK

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24505; Mature: 24373

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEARTTKDEIIQLLKVKGEHTVAELAEILEITEMAIRRHLSNLEKDGFIYSKMVRQHVG
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
RPTYLYGLSEKGEDTFPKEYKQFAIDMLEDLARMGDEQILRYVLKERTKRMEEQLQKRVS
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNCPLKEIAERFPQVCEDEKEMY
CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHH
NRLFAGADVKTLANMCEGDCSCSYQVKEKK
HHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GEARTTKDEIIQLLKVKGEHTVAELAEILEITEMAIRRHLSNLEKDGFIYSKMVRQHVG
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
RPTYLYGLSEKGEDTFPKEYKQFAIDMLEDLARMGDEQILRYVLKERTKRMEEQLQKRVS
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NQKNLAYKVQEIAAMQEKNGYMVQIKRDGENSFVIEKQNCPLKEIAERFPQVCEDEKEMY
CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHH
NRLFAGADVKTLANMCEGDCSCSYQVKEKK
HHHHCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA