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The map label for this gene is yutI [H]

Identifier: 49187811

GI number: 49187811

Start: 4712072

End: 4712308

Strand: Direct

Name: yutI [H]

Synonym: BAS4821

Alternate gene names: 49187811

Gene position: 4712072-4712308 (Clockwise)

Preceding gene: 49187806

Following gene: 49187812

Centisome position: 90.12

GC content: 40.51

Gene sequence:

>237_bases
ATGGAAAACCCACATATGCAAGAACAAGTACTAGAAGTATTAGATAAATTACGTCCATTCTTACTTCGCGATGGCGGAGA
CGTTGAGTTAGTAGACATTGAAGAAGGTATCGTAAAATTACGCCTTATGGGTGCATGCGGAAGCTGCCCAAGTTCTACAA
TCACACTAAAAGCTGGTATCGAACGCGCATTACTTGAAGAAGTACCAGGCGTTATCGAAGTAGAACAAGTATTTTAA

Upstream 100 bases:

>100_bases
TAAACATGATAAAAAATTTCGACAATAAAACAAGAACAGAAAAAATAGATTTTCCCCTCTATCTTGATTATAATAAAACT
GATGAAAGGAGTCGATAAAA

Downstream 100 bases:

>100_bases
TCTAAAAGCGGAAGCGGCTCGTTCAGAACAGGAGGTCATTGGAGCTCCTGACGAAGAGGCGCTTTTTGCCTCACAGGAAG
GCGCGAAATGGCCGACTGTT

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MENPHMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVIEVEQVF

Sequences:

>Translated_78_residues
MENPHMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVIEVEQVF
>Mature_78_residues
MENPHMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVIEVEQVF

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593025, Length=69, Percent_Identity=52.1739130434783, Blast_Score=67, Evalue=4e-12,
Organism=Homo sapiens, GI50593021, Length=69, Percent_Identity=52.1739130434783, Blast_Score=66, Evalue=5e-12,
Organism=Homo sapiens, GI50593023, Length=69, Percent_Identity=52.1739130434783, Blast_Score=65, Evalue=9e-12,
Organism=Homo sapiens, GI50593019, Length=69, Percent_Identity=52.1739130434783, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17541876, Length=72, Percent_Identity=45.8333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45551492, Length=70, Percent_Identity=47.1428571428571, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24643765, Length=70, Percent_Identity=47.1428571428571, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI45556188, Length=70, Percent_Identity=47.1428571428571, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8605; Mature: 8605

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPHMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI
CCCCCHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEHEECCCCCCCCCEEEEHHHH
ERALLEEVPGVIEVEQVF
HHHHHHHCCCCEEEHCCC
>Mature Secondary Structure
MENPHMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI
CCCCCHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEHEECCCCCCCCCEEEEHHHH
ERALLEEVPGVIEVEQVF
HHHHHHHCCCCEEEHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]