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The map label for this gene is yugI [H]

Identifier: 49187760

GI number: 49187760

Start: 4662623

End: 4662967

Strand: Reverse

Name: yugI [H]

Synonym: BAS4770

Alternate gene names: 49187760

Gene position: 4662967-4662623 (Counterclockwise)

Preceding gene: 49187761

Following gene: 49187758

Centisome position: 89.18

GC content: 36.23

Gene sequence:

>345_bases
ATGTCAGAACAATATACAACAGGAGTGGTTGTAACAGGGAAAGTGACTGGGATTCAAGATTACGGTGCATTTGTAGCGTT
AGATGCAGAAACACAAGGACTTGTGCATATATCTGAAATTACAAATGGATATGTAAAGGATATTCATGACTTTTTAAAAG
TCGGCGATACAGTAGAAGTAAAAGTACTTTCAATTGATGAAGAACACAGAAAAATGAGTTTATCGTTAAAAGCGGCGAAA
AGAAAACAAGGACGGATTCTTATACCGAATCCATCTGAGAATGGATTTAATACGCTGCGAGAAAAGCTAACAGAATGGAT
TGAAGAGTCCGAGTTAACAAAGTAA

Upstream 100 bases:

>100_bases
ACTTAGGGTACGTACTAACTAATCGGATATTTAACAATAAATCATCTGCTTTGCTATCTACAATTGTAGAGAAAATGGTA
AACGTATGGGAGTGTTTCAT

Downstream 100 bases:

>100_bases
AAGAGGAACGCATATGAGCGTTCCTCTTTTACTTTATCTTATGATATATATTTGCAAATATGATTGCATGCAATCATATT
CGTATGTCGGAGGTGAAGTA

Product: general stress protein 13

Products: NA

Alternate protein names: GSP13 [H]

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSEQYTTGVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTVEVKVLSIDEEHRKMSLSLKAAK
RKQGRILIPNPSENGFNTLREKLTEWIEESELTK

Sequences:

>Translated_114_residues
MSEQYTTGVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTVEVKVLSIDEEHRKMSLSLKAAK
RKQGRILIPNPSENGFNTLREKLTEWIEESELTK
>Mature_113_residues
SEQYTTGVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTVEVKVLSIDEEHRKMSLSLKAAKR
KQGRILIPNPSENGFNTLREKLTEWIEESELTK

Specific function: Unknown

COG id: COG1098

COG function: function code J; Predicted RNA binding protein (contains ribosomal protein S1 domain)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082262, Length=70, Percent_Identity=40, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI145693187, Length=79, Percent_Identity=45.5696202531646, Blast_Score=67, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17535281, Length=99, Percent_Identity=42.4242424242424, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 12736; Mature: 12604

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQYTTGVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTVEV
CCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEHHHHCCHHHHHHHHHHHCCCEEEE
KVLSIDEEHRKMSLSLKAAKRKQGRILIPNPSENGFNTLREKLTEWIEESELTK
EEEEECCCHHHEEHHEEHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEQYTTGVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTVEV
CCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEHHHHCCHHHHHHHHHHHCCCEEEE
KVLSIDEEHRKMSLSLKAAKRKQGRILIPNPSENGFNTLREKLTEWIEESELTK
EEEEECCCHHHEEHHEEHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 9298659 [H]