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The map label for this gene is yisV [H]

Identifier: 49187727

GI number: 49187727

Start: 4618902

End: 4619627

Strand: Reverse

Name: yisV [H]

Synonym: BAS4736

Alternate gene names: 49187727

Gene position: 4619627-4618902 (Counterclockwise)

Preceding gene: 49187728

Following gene: 49187726

Centisome position: 88.35

GC content: 36.78

Gene sequence:

>726_bases
GTGGGTGTAACGGTGAACGTAACGAGGAAAAAAGGACCATTATATTTACAAATAAAAAACATTATTCGTGATCGAATATT
GCATGGTGTATATGCAATTCATACGAATATTCCTTCCGAACCGCAGTTAGAAGAAGAGTTCAAAGTGAGTAAAATTACAG
TACGAAATGCGATTAAAGAACTCGCTCAAGAAGGATATTTAGAAAAGAAAAGCGGTAAAGGAACGAAAGTCATCCGCAAT
ACTTCTGCGACAAAACTGTCAAAGGGAAAGAAATTTACTGAAGTGTTAGTGGAAGAAGGCTATAAAGTACAGAAGAAATT
GTTAAAAGCAGAAATCGTTCAGAATGAAGAAGGAACAGTGCTATTTCGATTATTCGGTAAAGAGAGTTTTCGTATTGAAC
GTTTATATACGTTAAATGATGCACCGTATATTCATTATACGCACTATTTTTCAGCGAAAATGGCAAGTACAGATTTATCG
GACTTTGACTTGCAATCGCTTTACGATTTAGTCGAGGACCGAGGCATTCATTTAGAAAACTTCAGAGATGAATTTGCTGT
TGGACTTGCGCCTAGTTTCGTTGCAGAAGCGTTAGGTGAAAAAGAGGGGACAGCGCTATTAAAACGTATGCGTTATTCTT
ACGATGAAGTTGGCGAAGTAATTGAATACAGCGAAGGCTACTACAATACAGAAATGCAGCATTATGTAGTGAATTATGAC
GTATAA

Upstream 100 bases:

>100_bases
CTGGAATGCTTGCACATACAATCGTCGGTGATACGCCAATGTCATCAGAGAAGGATATACTTCGGGCAATGACGGCATCA
GTAGGTGATGTAGAAAGGTA

Downstream 100 bases:

>100_bases
AAAAGAGGGGATTTTCCCTCTTTTTTTATAAAGTAAGGGGAATGGGAGATGGATATATACTTATTAATCGTCACATTACT
TGCAATTGCAATTGTCATTT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MGVTVNVTRKKGPLYLQIKNIIRDRILHGVYAIHTNIPSEPQLEEEFKVSKITVRNAIKELAQEGYLEKKSGKGTKVIRN
TSATKLSKGKKFTEVLVEEGYKVQKKLLKAEIVQNEEGTVLFRLFGKESFRIERLYTLNDAPYIHYTHYFSAKMASTDLS
DFDLQSLYDLVEDRGIHLENFRDEFAVGLAPSFVAEALGEKEGTALLKRMRYSYDEVGEVIEYSEGYYNTEMQHYVVNYD
V

Sequences:

>Translated_241_residues
MGVTVNVTRKKGPLYLQIKNIIRDRILHGVYAIHTNIPSEPQLEEEFKVSKITVRNAIKELAQEGYLEKKSGKGTKVIRN
TSATKLSKGKKFTEVLVEEGYKVQKKLLKAEIVQNEEGTVLFRLFGKESFRIERLYTLNDAPYIHYTHYFSAKMASTDLS
DFDLQSLYDLVEDRGIHLENFRDEFAVGLAPSFVAEALGEKEGTALLKRMRYSYDEVGEVIEYSEGYYNTEMQHYVVNYD
V
>Mature_240_residues
GVTVNVTRKKGPLYLQIKNIIRDRILHGVYAIHTNIPSEPQLEEEFKVSKITVRNAIKELAQEGYLEKKSGKGTKVIRNT
SATKLSKGKKFTEVLVEEGYKVQKKLLKAEIVQNEEGTVLFRLFGKESFRIERLYTLNDAPYIHYTHYFSAKMASTDLSD
FDLQSLYDLVEDRGIHLENFRDEFAVGLAPSFVAEALGEKEGTALLKRMRYSYDEVGEVIEYSEGYYNTEMQHYVVNYDV

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=235, Percent_Identity=25.1063829787234, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27728; Mature: 27597

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTVNVTRKKGPLYLQIKNIIRDRILHGVYAIHTNIPSEPQLEEEFKVSKITVRNAIKE
CCEEEEEECCCCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LAQEGYLEKKSGKGTKVIRNTSATKLSKGKKFTEVLVEEGYKVQKKLLKAEIVQNEEGTV
HHHCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCE
LFRLFGKESFRIERLYTLNDAPYIHYTHYFSAKMASTDLSDFDLQSLYDLVEDRGIHLEN
EEEEECCCCEEEEEEEEECCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHCCCCHHH
FRDEFAVGLAPSFVAEALGEKEGTALLKRMRYSYDEVGEVIEYSEGYYNTEMQHYVVNYD
HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEC
V
C
>Mature Secondary Structure 
GVTVNVTRKKGPLYLQIKNIIRDRILHGVYAIHTNIPSEPQLEEEFKVSKITVRNAIKE
CEEEEEECCCCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LAQEGYLEKKSGKGTKVIRNTSATKLSKGKKFTEVLVEEGYKVQKKLLKAEIVQNEEGTV
HHHCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCE
LFRLFGKESFRIERLYTLNDAPYIHYTHYFSAKMASTDLSDFDLQSLYDLVEDRGIHLEN
EEEEECCCCEEEEEEEEECCCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHCCCCHHH
FRDEFAVGLAPSFVAEALGEKEGTALLKRMRYSYDEVGEVIEYSEGYYNTEMQHYVVNYD
HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]