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The map label for this gene is gerPF [H]

Identifier: 49187683

GI number: 49187683

Start: 4579968

End: 4580183

Strand: Reverse

Name: gerPF [H]

Synonym: BAS4692

Alternate gene names: 49187683

Gene position: 4580183-4579968 (Counterclockwise)

Preceding gene: 49187684

Following gene: 49187680

Centisome position: 87.6

GC content: 36.57

Gene sequence:

>216_bases
ATGCCATCAGTTGTGGAAGGTGTTATTATTGAAAACTGTAACGGAACGATTAATTTAGGAGATAAATATAATGTGCAGCC
GATTGAAAAAACGCAAGCTTATAATGGATCGGGATCATCGAATACAGGGATTAAAGTACAAACATTTAGCGGGATTAGTA
CAGCAGATGTAGGGGATAGTGATGCGAATGACCAAGGAATACAATTTACTTTATAG

Upstream 100 bases:

>100_bases
AAAAAGCACTCAGTTGGAGTGCTTTTTTCTTATGGAAACATGCTATTTTGTTAGGCGCTTTTCATAGAATGAAAGTAAGG
AAATGAAAGTGGGTGACAAA

Downstream 100 bases:

>100_bases
AGAAATATGCAAAGTTGCATAAAATGATGAACTTGCCCTGTGCTACAATCTAACTGTGAGCTGTTAATGATTCTTCTGTA
TTATAGTTGTTAGATTAGAA

Product: spore germination protein GerPF-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPSVVEGVIIENCNGTINLGDKYNVQPIEKTQAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL

Sequences:

>Translated_71_residues
MPSVVEGVIIENCNGTINLGDKYNVQPIEKTQAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL
>Mature_70_residues
PSVVEGVIIENCNGTINLGDKYNVQPIEKTQAYNGSGSSNTGIKVQTFSGISTADVGDSDANDQGIQFTL

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 7410; Mature: 7279

Theoretical pI: Translated: 3.83; Mature: 3.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVVEGVIIENCNGTINLGDKYNVQPIEKTQAYNGSGSSNTGIKVQTFSGISTADVGDS
CCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCC
DANDQGIQFTL
CCCCCCEEEEC
>Mature Secondary Structure 
PSVVEGVIIENCNGTINLGDKYNVQPIEKTQAYNGSGSSNTGIKVQTFSGISTADVGDS
CCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCC
DANDQGIQFTL
CCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]