Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is luxS
Identifier: 49187678
GI number: 49187678
Start: 4575811
End: 4576284
Strand: Reverse
Name: luxS
Synonym: BAS4687
Alternate gene names: 49187678
Gene position: 4576284-4575811 (Counterclockwise)
Preceding gene: 49187680
Following gene: 49187676
Centisome position: 87.52
GC content: 34.39
Gene sequence:
>474_bases ATGCCATCAGTAGAAAGCTTTGAATTAGATCATACGATTGTAAAGGCACCTTATGTAAGACATTGCGGAGTTCACAATGT AGGTAGTGACGGTATTGTAAATAAATTCGATATTCGTTTTTGCCAACCGAATAAACAAGCAATGAAACCAGATGTTATTC ATACGTTAGAACATTTATTAGCATTTAATTTACGTAAATATATTGATCGTTATCCACATTTTGATATTATCGATATTTCA CCAATGGGCTGCCAAACAGGATACTACCTTGTAGTAAGCGGAACACCGACAGTTCGAGAAATCATTGATTTATTAGAATT AACATTAAAAGATGCGGTTCAAATTACAGAAATTCCAGCTGCAAATGAAACACAATGTGGTCAAGCGAAGCTTCACGATT TAGAAGGAGCAAAACGCTTAATGAACTTCTGGTTAAGCCAAGATAAAGATGAACTTGAGAAAGTATTTGGATAA
Upstream 100 bases:
>100_bases AGTATTATAGCACGACTGTACATAATACTTTACTAATGTGCATTTCCGTTATATCATATTGGATATAACGGAATTAAATT AAAAGCGGGAGAGATGTTGT
Downstream 100 bases:
>100_bases AGTGAGACTGCCTGTGAAAGGGCAGTTTTTTTGTGGCATGATAATAAATGAAATTATATCAACGATTTTTCGAATATATC GACTGTAACTTGAAATATAT
Product: S-ribosylhomocysteinase
Products: NA
Alternate protein names: AI-2 synthesis protein; Autoinducer-2 production protein luxS
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLLAFNLRKYIDRYPHFDIIDIS PMGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQITEIPAANETQCGQAKLHDLEGAKRLMNFWLSQDKDELEKVFG
Sequences:
>Translated_157_residues MPSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLLAFNLRKYIDRYPHFDIIDIS PMGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQITEIPAANETQCGQAKLHDLEGAKRLMNFWLSQDKDELEKVFG >Mature_156_residues PSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLLAFNLRKYIDRYPHFDIIDISP MGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQITEIPAANETQCGQAKLHDLEGAKRLMNFWLSQDKDELEKVFG
Specific function: Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is ca
COG id: COG1854
COG function: function code T; LuxS protein involved in autoinducer AI2 synthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the luxS family
Homologues:
Organism=Escherichia coli, GI1789043, Length=151, Percent_Identity=38.4105960264901, Blast_Score=114, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LUXS_BACAA (C3PCE7)
Other databases:
- EMBL: CP001598 - RefSeq: YP_002869066.1 - ProteinModelPortal: C3PCE7 - SMR: C3PCE7 - EnsemblBacteria: EBBACT00000126981 - GeneID: 7850859 - GenomeReviews: CP001598_GR - KEGG: bai:BAA_5058 - GeneTree: EBGT00050000002559 - ProtClustDB: PRK02260 - HAMAP: MF_00091 - InterPro: IPR011249 - InterPro: IPR003815 - Gene3D: G3DSA:3.30.1360.80 - PIRSF: PIRSF006160 - PRINTS: PR01487 - ProDom: PD013172
Pfam domain/function: PF02664 LuxS; SSF63411 Metalloenz_metal-bd
EC number: =4.4.1.21
Molecular weight: Translated: 17856; Mature: 17725
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLL CCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH AFNLRKYIDRYPHFDIIDISPMGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQITEIPA HHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC ANETQCGQAKLHDLEGAKRLMNFWLSQDKDELEKVFG CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure PSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLL CCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH AFNLRKYIDRYPHFDIIDISPMGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQITEIPA HHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC ANETQCGQAKLHDLEGAKRLMNFWLSQDKDELEKVFG CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA