Click here to switch to the map view.

The map label for this gene is yisY [H]

Identifier: 49187661

GI number: 49187661

Start: 4564088

End: 4564897

Strand: Direct

Name: yisY [H]

Synonym: BAS4670

Alternate gene names: 49187661

Gene position: 4564088-4564897 (Clockwise)

Preceding gene: 49187658

Following gene: 49187666

Centisome position: 87.29

GC content: 37.78

Gene sequence:

>810_bases
ATGTTTGTTACCGTCGAGAAAGATGTGCATATTTTTGTGCAAGATATTAATCCCGGCCCCAGTAGTAAAACTGCGTTCTT
CGTCCATGGCTGGCCTTTAAATCATCAAATGTACCAGTATCAACTTAATGTATTACCACAGCACGGTTTCCGCTGTATTG
CTATGGATATACGCGGAAACGGGCAATCTGATAAACCTTGGACTGGTTACACATATGATCGTTTAGCAGACGATATAGCC
ATCGTTTTAGAAGCACTTCAAGTCGAAAATGCTACATTAGTTGGTTTCTCAGTAGGTGGTGCTCTTTCTATTCGGTACAT
GTCTCGCTATAATGGTCATCGCATTTCTAAACTTGTATTAGTCGATGCCGTTTCCCCTTCTTTCGTTAAAAATCCAGAAT
CTCCCTATGGTGTCCCAAAAGAACAAGCAGATACTCTCATTAATCAAATGTATGCCAATATGCCTAAATTTTTAAATGAT
GTATCTTTATCATTTTTTAATAGAAACTTAGGATCTGCTACGTTAGAATGGTTTTCTTATCTCGGCATGCAGTCTGCTTC
CTATGCTCTCATCAAAATATTGCAAGCAGCCGCAAATGAAGATGTAACGAAAGATTTAAGTAAAATTAACGTACCAACAA
AAATATTCCACGGTATTCACGATCAACTTATCCCATACAAAAGCGCTGAACTTACGCAAAAACGAATTAAAAATTCTCAG
TTACATCCTCTTACAAATAGTGGTCACGGCTCCCCAATCGATCAAGCGGATGAATTAAACGAAGAACTTATAAAGTTTTT
GCATTCATAA

Upstream 100 bases:

>100_bases
TCTTAATAGAACAAAACCCTACGCTCCGGGTGAATAAATGTATGAAAGCTATGACGAAACAAAGCTTTTTGGAAAGAGCG
TATGAATAGGAGGATCATTC

Downstream 100 bases:

>100_bases
AAGACGTACTACAAGTTTTTACAAAGATAAAATTCACATATTTCTCACAAATCAATTAATAAAACGATTACATTTTCATT
TATACTAAATGTACAGGTAA

Product: alpha/beta fold family hydrolase

Products: 2-oxopent-4-enoate; succinate [C]

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MFVTVEKDVHIFVQDINPGPSSKTAFFVHGWPLNHQMYQYQLNVLPQHGFRCIAMDIRGNGQSDKPWTGYTYDRLADDIA
IVLEALQVENATLVGFSVGGALSIRYMSRYNGHRISKLVLVDAVSPSFVKNPESPYGVPKEQADTLINQMYANMPKFLND
VSLSFFNRNLGSATLEWFSYLGMQSASYALIKILQAAANEDVTKDLSKINVPTKIFHGIHDQLIPYKSAELTQKRIKNSQ
LHPLTNSGHGSPIDQADELNEELIKFLHS

Sequences:

>Translated_269_residues
MFVTVEKDVHIFVQDINPGPSSKTAFFVHGWPLNHQMYQYQLNVLPQHGFRCIAMDIRGNGQSDKPWTGYTYDRLADDIA
IVLEALQVENATLVGFSVGGALSIRYMSRYNGHRISKLVLVDAVSPSFVKNPESPYGVPKEQADTLINQMYANMPKFLND
VSLSFFNRNLGSATLEWFSYLGMQSASYALIKILQAAANEDVTKDLSKINVPTKIFHGIHDQLIPYKSAELTQKRIKNSQ
LHPLTNSGHGSPIDQADELNEELIKFLHS
>Mature_269_residues
MFVTVEKDVHIFVQDINPGPSSKTAFFVHGWPLNHQMYQYQLNVLPQHGFRCIAMDIRGNGQSDKPWTGYTYDRLADDIA
IVLEALQVENATLVGFSVGGALSIRYMSRYNGHRISKLVLVDAVSPSFVKNPESPYGVPKEQADTLINQMYANMPKFLND
VSLSFFNRNLGSATLEWFSYLGMQSASYALIKILQAAANEDVTKDLSKINVPTKIFHGIHDQLIPYKSAELTQKRIKNSQ
LHPLTNSGHGSPIDQADELNEELIKFLHS

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.7.1.- [C]

Molecular weight: Translated: 30202; Mature: 30202

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTVEKDVHIFVQDINPGPSSKTAFFVHGWPLNHQMYQYQLNVLPQHGFRCIAMDIRGN
CEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCC
GQSDKPWTGYTYDRLADDIAIVLEALQVENATLVGFSVGGALSIRYMSRYNGHRISKLVL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEHHHCCCCEEEEEEE
VDAVSPSFVKNPESPYGVPKEQADTLINQMYANMPKFLNDVSLSFFNRNLGSATLEWFSY
EECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGMQSASYALIKILQAAANEDVTKDLSKINVPTKIFHGIHDQLIPYKSAELTQKRIKNSQ
HCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
LHPLTNSGHGSPIDQADELNEELIKFLHS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFVTVEKDVHIFVQDINPGPSSKTAFFVHGWPLNHQMYQYQLNVLPQHGFRCIAMDIRGN
CEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCC
GQSDKPWTGYTYDRLADDIAIVLEALQVENATLVGFSVGGALSIRYMSRYNGHRISKLVL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEHHHCCCCEEEEEEE
VDAVSPSFVKNPESPYGVPKEQADTLINQMYANMPKFLNDVSLSFFNRNLGSATLEWFSY
EECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGMQSASYALIKILQAAANEDVTKDLSKINVPTKIFHGIHDQLIPYKSAELTQKRIKNSQ
HCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
LHPLTNSGHGSPIDQADELNEELIKFLHS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]

Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377 [H]