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The map label for this gene is ytpB [H]

Identifier: 49187644

GI number: 49187644

Start: 4547054

End: 4548130

Strand: Reverse

Name: ytpB [H]

Synonym: BAS4653

Alternate gene names: 49187644

Gene position: 4548130-4547054 (Counterclockwise)

Preceding gene: 49187645

Following gene: 49187643

Centisome position: 86.98

GC content: 38.63

Gene sequence:

>1077_bases
ATGAAGGAAGAAGTGAACGTACCGAGTAATCCCATAACGCTCATGGCGAAAGTATACCGTGATGTGTTTCCGGTTGTACA
CCATGAGCTAGCGATGTGGAAAGAGCGTGCCTACCATATTCCGAATGATGAGCTTCATAGTCAGGCAATCGCAAGTATTG
AGCATAAAACGTTTCATTGCGAAGGCGGTGGCATTTTAGCGCTATTAGCAAATGAACACCGTGAGGAATGTATTCGTTTT
ATCGTCGCATATCAAACGATCAGCGACTATTTAGATAATTTATGTGATCGCAGTACATCACTTGATCCGAATGATTTTGC
CGCACTGCATGAATCTATGTTAATGGCATTATCACCTGAAGTAGAAGGTGGCGGTAATTATTATCGCTATCGTGATGATC
AAGATGATGGTGGTTATTTAGATGAACTTGTTGAAACATGCCAAGATGTTTTAAAGAAAACGAAGCACTATGACAAAATT
GCTCCTATTCTTCATGAACTTGCTTGTTATTATTGTGATTTGCAAATTCATAAACATGTGAAATTAGAAGAAAGAGAACC
ACGATTACAAACATGGTTTGAAGCACATAAAGAAAACTTACCTGAGATGAGTTGGTTTGAATTTTCAGCATGTGCCGGTT
CTACGCTTGGAATCTTCTGTCTTGTAGCATATGCTTTTCATGATGAATTACATGATGAAGATATTGCGAAAATTAGACAA
GGATATTTTCCTTACGTACAAGGACTTCATATCTTACTTGATTATTTCATTGATCAAGAAGAAGACCGCATCGGCGGGGA
TTTGAATTTCTGTAGTTATTATGAAAACGAGCAAGTGATATTAGATCGTATGAAACATTTTGTAGAAGAAGCAGAGAAGA
GCATTGGTGATTTGCCTCACGCGAAGTTTCATCGTCTCATAAGCCGAGGATTACTTGGTATTTATTTATCAGATCAAAAA
GTATCAGCACAAAAGAATATGCACAAAATGGCACGGCGCATTGTAAAATATGGAGGCCTCACTTCACGATTCTTCTATTG
GAACGGGAAGATGTACCGAAAGAAAACGGCGCAGTGA

Upstream 100 bases:

>100_bases
CGTGATGAAATTTTGAATTATATTCAGTCATTTACTGAAATACGCATCAATAACATAATAGAAACAAATAAGTAAATTAT
TTGTACATTGAATAGAGGAG

Downstream 100 bases:

>100_bases
TGAAGAAAACCACTCATGTAGAGTGGTTTTTTGTTATAATATGGTAAAGGTGGTGGTGAAAATGAAGCGATTGTTTCAAA
AGCTATATGACAATATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKEEVNVPSNPITLMAKVYRDVFPVVHHELAMWKERAYHIPNDELHSQAIASIEHKTFHCEGGGILALLANEHREECIRF
IVAYQTISDYLDNLCDRSTSLDPNDFAALHESMLMALSPEVEGGGNYYRYRDDQDDGGYLDELVETCQDVLKKTKHYDKI
APILHELACYYCDLQIHKHVKLEEREPRLQTWFEAHKENLPEMSWFEFSACAGSTLGIFCLVAYAFHDELHDEDIAKIRQ
GYFPYVQGLHILLDYFIDQEEDRIGGDLNFCSYYENEQVILDRMKHFVEEAEKSIGDLPHAKFHRLISRGLLGIYLSDQK
VSAQKNMHKMARRIVKYGGLTSRFFYWNGKMYRKKTAQ

Sequences:

>Translated_358_residues
MKEEVNVPSNPITLMAKVYRDVFPVVHHELAMWKERAYHIPNDELHSQAIASIEHKTFHCEGGGILALLANEHREECIRF
IVAYQTISDYLDNLCDRSTSLDPNDFAALHESMLMALSPEVEGGGNYYRYRDDQDDGGYLDELVETCQDVLKKTKHYDKI
APILHELACYYCDLQIHKHVKLEEREPRLQTWFEAHKENLPEMSWFEFSACAGSTLGIFCLVAYAFHDELHDEDIAKIRQ
GYFPYVQGLHILLDYFIDQEEDRIGGDLNFCSYYENEQVILDRMKHFVEEAEKSIGDLPHAKFHRLISRGLLGIYLSDQK
VSAQKNMHKMARRIVKYGGLTSRFFYWNGKMYRKKTAQ
>Mature_358_residues
MKEEVNVPSNPITLMAKVYRDVFPVVHHELAMWKERAYHIPNDELHSQAIASIEHKTFHCEGGGILALLANEHREECIRF
IVAYQTISDYLDNLCDRSTSLDPNDFAALHESMLMALSPEVEGGGNYYRYRDDQDDGGYLDELVETCQDVLKKTKHYDKI
APILHELACYYCDLQIHKHVKLEEREPRLQTWFEAHKENLPEMSWFEFSACAGSTLGIFCLVAYAFHDELHDEDIAKIRQ
GYFPYVQGLHILLDYFIDQEEDRIGGDLNFCSYYENEQVILDRMKHFVEEAEKSIGDLPHAKFHRLISRGLLGIYLSDQK
VSAQKNMHKMARRIVKYGGLTSRFFYWNGKMYRKKTAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019712 [H]

Pfam domain/function: PF10776 DUF2600 [H]

EC number: NA

Molecular weight: Translated: 41745; Mature: 41745

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEVNVPSNPITLMAKVYRDVFPVVHHELAMWKERAYHIPNDELHSQAIASIEHKTFHC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEE
EGGGILALLANEHREECIRFIVAYQTISDYLDNLCDRSTSLDPNDFAALHESMLMALSPE
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VEGGGNYYRYRDDQDDGGYLDELVETCQDVLKKTKHYDKIAPILHELACYYCDLQIHKHV
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KLEEREPRLQTWFEAHKENLPEMSWFEFSACAGSTLGIFCLVAYAFHDELHDEDIAKIRQ
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
GYFPYVQGLHILLDYFIDQEEDRIGGDLNFCSYYENEQVILDRMKHFVEEAEKSIGDLPH
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
AKFHRLISRGLLGIYLSDQKVSAQKNMHKMARRIVKYGGLTSRFFYWNGKMYRKKTAQ
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCC
>Mature Secondary Structure
MKEEVNVPSNPITLMAKVYRDVFPVVHHELAMWKERAYHIPNDELHSQAIASIEHKTFHC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEE
EGGGILALLANEHREECIRFIVAYQTISDYLDNLCDRSTSLDPNDFAALHESMLMALSPE
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VEGGGNYYRYRDDQDDGGYLDELVETCQDVLKKTKHYDKIAPILHELACYYCDLQIHKHV
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KLEEREPRLQTWFEAHKENLPEMSWFEFSACAGSTLGIFCLVAYAFHDELHDEDIAKIRQ
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
GYFPYVQGLHILLDYFIDQEEDRIGGDLNFCSYYENEQVILDRMKHFVEEAEKSIGDLPH
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
AKFHRLISRGLLGIYLSDQKVSAQKNMHKMARRIVKYGGLTSRFFYWNGKMYRKKTAQ
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]