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The map label for this gene is gerIA [H]

Identifier: 49187622

GI number: 49187622

Start: 4523212

End: 4525455

Strand: Direct

Name: gerIA [H]

Synonym: BAS4630

Alternate gene names: 49187622

Gene position: 4523212-4525455 (Clockwise)

Preceding gene: 49187620

Following gene: 49187623

Centisome position: 86.51

GC content: 36.81

Gene sequence:

>2244_bases
ATGATTTGGAATTGGCTACGTAAGAAAAAAAAATTAAATACAACAGAGAAAAACGAAACAGATAATTCGGAGCAAAAACC
TAACAATCAAGAGGATGACAACAAAGAACAGACTAGAAGTACGAAACATAATAAAAGTAACAATAGCGAGCAAAAAAAAG
AGGAACACAAGGAATCTTCTCAAGATAAGCAGCAAAATCAATCGAATCAAAATCAGCAACAAAGTGCTAAACAAGATGAA
TCTTCTCAGGGGCAACAGAATCATTCTAAGCAAGACGACTCCGATCAGGGGCAACAGCAACACTCTAAGCAAGGCAACTC
CGATCAGGGGCAACAGCAACACTCTAAGCAAGGCGACTCGAATCAAGGGCAACAGAATCATTCTAAGCAGAACGACTCCG
ATCAGGGGCAACAGCAACACTCTAAACAAGATGAATCTTCTCAAGAGCAACAGAATCATTCTAAGCAAGACGACTCCGAT
CAGGGGCAACAGCAACACTCTAAACAAGATGAATCTTCTCAAGAGCAACAGAATCATTCTAAGCAAGACGACTCCGATCA
GGGGCAACAGCAACACTCTAAACAAGATGAATCTTCTCAAGAGCAACAGAATCATTCTAAGCAAGACGACTCCGATCAGG
ATGATTCATTCCAGGATACGCAGCAAAGCTCCAAGCAAGATGATTTAGCACAAGATAAACAGCAACACTCTAAACAAGAC
AACTCAGATCAGGATAAGCAACAAAATTCTAAAGGTAATAGTATTTATGATTTTTCGAAACCAGAAAAAGATCGTATTCA
TTCTTTACAAGATTTAATAGAGAAACTGAAAAAGTCTAGTGATTTTGTGAATTATCATACATCTGACGATGAAACGATGC
CTTATTGGATTTCTTACTATCGTCCTTCACTTGATGGTGAGAAATTGCAAAAGTATTTAATGCCTACTCTTTTAGAACGA
CCTAACGCATCACTAGAAGAGCTGAAGGAACATATTCCAATGAGCGGCATTACAATTACAAACGATTTACAAAAAATTGA
GGACATGGTTTTAAAGGGACATGCGATTGTTCAAGTAAATCAACAAGATCAAAAATGTATGCTCGCAAATATTGCAATTG
ATAATTATCGTGCACCAACTCCACCTTTAAACGAATCGACTGTTATTGGTCCGCAAGAAGGTTTTGTAGAGGACATTGAC
ACAAATATTAATTTAGTTCGAAAACGTCTTCCTGTTTTAGATTTACAAACAAAAGAAATGATTGTCGGTGAGTTTTCCAA
AACAAAAGTTGTCATGATGTATTTAGACAATCTCGCTGAAAAAGATAATGTAGATTTTCTCGAGGAATCATTACGTGCTC
TTGAATATGATCAAATTAATGATAGTGCTTATATACAAGAATTGATGGGAGAAAAGTCGATTTTTCCTCTTTATATCAAT
ACAGAACGCACTGATAGAGTTACAAAAGCATTAATCGATGGAAAAATCGCTATTTTTGTGGACGGTTCTCCAAGTGTTTT
ATTAACACCTGTATCCTATTTCGATTTTTTCATTTCACCAGAAGACTACAACGTCTCTTGGCTATACGCTACATTTTCAA
GGATTTTACGCCTTATCGCCGTTCTATTCTCGATATGCGCTACACCGTTATACGTTGCAGTTTTAAATTATCATTATGAA
CTCATTCCAAGTGATTTACTTGAAACTTTAATTTTATCAAGGGCACAAGTACCATTCCCACCTTTAATTGAAGCTCTCTT
TTTAGAACTCGCAATCGACTTATTGAGAGAAGCTGGGGCGAGGTTACCGATGAAAGTTGGTCAAACGCTCGGTATTGTAG
GCGGTATCGTAATCGGACAAGCATCTGTACAAGCTGGTTTAACGAGTAATATTTTATTAATTATCGTCGCCTTATCAGCA
CTCGCTTCCTTTATTACACCTATTTATAAAATGGGGAATGCGGTTCGATTACTACGCTTCCCGTTTCTCATATTTGCAGA
AATAGGAGGACTTTTCGGGATTTCTCTTGGGTTTATCTTTTTATTTACTCATCTATTTAGACTTACTTCCTTACGTAAAC
CATACGCTTTGTTTTATCCAACAAGACAACAATCTGTTAAAGATTCTTGGATTCGTTTTCCTTTAACAATGATTGATACA
AGAGATGTACAAGCAAGGCCACAGCATGTAAAAAAATCAGCAAAAGGAATTTCAACAAAACATAGATCGGACTTTGATGA
TTAA

Upstream 100 bases:

>100_bases
TATGCAAACCAATCTCCTCCTTCTTTTCATAAATAAATGAATAATATACAAAATTAGCCACAAAATAGCACTATATTACA
CAATCAAAGAGGGCATACAT

Downstream 100 bases:

>100_bases
GAAATGAGGTGCATTCGATGAGTAAAGTTCAAGAAAAATATCAAATATCTCCTATCTTCGTTTTCTTCTTAATTCACGGT
GCACAGTTTGGAGCTGGCGT

Product: spore germination protein GerHA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 747; Mature: 747

Protein sequence:

>747_residues
MIWNWLRKKKKLNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESSQDKQQNQSNQNQQQSAKQDE
SSQGQQNHSKQDDSDQGQQQHSKQGNSDQGQQQHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDESSQEQQNHSKQDDSD
QGQQQHSKQDESSQEQQNHSKQDDSDQGQQQHSKQDESSQEQQNHSKQDDSDQDDSFQDTQQSSKQDDLAQDKQQHSKQD
NSDQDKQQNSKGNSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLER
PNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDID
TNINLVRKRLPVLDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYIN
TERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYE
LIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSA
LASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDT
RDVQARPQHVKKSAKGISTKHRSDFDD

Sequences:

>Translated_747_residues
MIWNWLRKKKKLNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESSQDKQQNQSNQNQQQSAKQDE
SSQGQQNHSKQDDSDQGQQQHSKQGNSDQGQQQHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDESSQEQQNHSKQDDSD
QGQQQHSKQDESSQEQQNHSKQDDSDQGQQQHSKQDESSQEQQNHSKQDDSDQDDSFQDTQQSSKQDDLAQDKQQHSKQD
NSDQDKQQNSKGNSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLER
PNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDID
TNINLVRKRLPVLDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYIN
TERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYE
LIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSA
LASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDT
RDVQARPQHVKKSAKGISTKHRSDFDD
>Mature_747_residues
MIWNWLRKKKKLNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESSQDKQQNQSNQNQQQSAKQDE
SSQGQQNHSKQDDSDQGQQQHSKQGNSDQGQQQHSKQGDSNQGQQNHSKQNDSDQGQQQHSKQDESSQEQQNHSKQDDSD
QGQQQHSKQDESSQEQQNHSKQDDSDQGQQQHSKQDESSQEQQNHSKQDDSDQDDSFQDTQQSSKQDDLAQDKQQHSKQD
NSDQDKQQNSKGNSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYYRPSLDGEKLQKYLMPTLLER
PNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDID
TNINLVRKRLPVLDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYIN
TERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIAVLFSICATPLYVAVLNYHYE
LIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSA
LASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDT
RDVQARPQHVKKSAKGISTKHRSDFDD

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 85381; Mature: 85381

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWNWLRKKKKLNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESS
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
QDKQQNQSNQNQQQSAKQDESSQGQQNHSKQDDSDQGQQQHSKQGNSDQGQQQHSKQGDS
HHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCC
NQGQQNHSKQNDSDQGQQQHSKQDESSQEQQNHSKQDDSDQGQQQHSKQDESSQEQQNHS
CCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCC
KQDDSDQGQQQHSKQDESSQEQQNHSKQDDSDQDDSFQDTQQSSKQDDLAQDKQQHSKQD
CCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NSDQDKQQNSKGNSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYY
CCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH
RPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVN
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEEC
QQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEM
CCCCHHHHHHEECCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHCCCCCCCHHHH
IVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYIN
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEC
TERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIA
CCHHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHEECCCCCCCCHHHHHHHHHHHHHH
VLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGA
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
RLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRF
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
PFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHCCC
RDVQARPQHVKKSAKGISTKHRSDFDD
CCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIWNWLRKKKKLNTTEKNETDNSEQKPNNQEDDNKEQTRSTKHNKSNNSEQKKEEHKESS
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
QDKQQNQSNQNQQQSAKQDESSQGQQNHSKQDDSDQGQQQHSKQGNSDQGQQQHSKQGDS
HHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCC
NQGQQNHSKQNDSDQGQQQHSKQDESSQEQQNHSKQDDSDQGQQQHSKQDESSQEQQNHS
CCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCC
KQDDSDQGQQQHSKQDESSQEQQNHSKQDDSDQDDSFQDTQQSSKQDDLAQDKQQHSKQD
CCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NSDQDKQQNSKGNSIYDFSKPEKDRIHSLQDLIEKLKKSSDFVNYHTSDDETMPYWISYY
CCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH
RPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVN
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEEC
QQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEM
CCCCHHHHHHEECCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHCCCCCCCHHHH
IVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEKSIFPLYIN
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEC
TERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFSRILRLIA
CCHHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHEECCCCCCCCHHHHHHHHHHHHHH
VLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGA
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
RLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRF
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
PFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIRFPLTMIDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHCCC
RDVQARPQHVKKSAKGISTKHRSDFDD
CCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]