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The map label for this gene is ytzE [H]

Identifier: 49187594

GI number: 49187594

Start: 4502300

End: 4502521

Strand: Direct

Name: ytzE [H]

Synonym: BAS4601

Alternate gene names: 49187594

Gene position: 4502300-4502521 (Clockwise)

Preceding gene: 49187588

Following gene: 49187597

Centisome position: 86.11

GC content: 40.99

Gene sequence:

>222_bases
TTGAAACCTACAACTACTCGTATGCTAACACGCATTAAATCAATTTATATGTACATCAATGAAAACGGAACGGTAACGAC
GAAAGACCTTGTAGATGAGTTCGGGATCACACCGCGAACGATACAACGTGATCTAAATGTGTTGCAGTTTAATGAACTCG
TGTATAGCCCTTGCCGCGGTAAGTGGACAACAACAGGAAAGAAAGTGAGAATGACCTCATAA

Upstream 100 bases:

>100_bases
AGTAGATTAAAGCATGAATTTTATCATGTAGAGTACAATGGTAGTAACGACCTTCTTTCCTGAATGGGGTCAAAAAAACT
AGTAGAGGAGTGGTTTTCTC

Downstream 100 bases:

>100_bases
CGAAAAATAATTGTATGTAAATAAATACATACCCCTTTCTAACTCATTAGAAAGGGGTCTTTTCTGCGCCTAAAAATAGC
ACTATTTCTCATTGTCTACT

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKPTTTRMLTRIKSIYMYINENGTVTTKDLVDEFGITPRTIQRDLNVLQFNELVYSPCRGKWTTTGKKVRMTS

Sequences:

>Translated_73_residues
MKPTTTRMLTRIKSIYMYINENGTVTTKDLVDEFGITPRTIQRDLNVLQFNELVYSPCRGKWTTTGKKVRMTS
>Mature_73_residues
MKPTTTRMLTRIKSIYMYINENGTVTTKDLVDEFGITPRTIQRDLNVLQFNELVYSPCRGKWTTTGKKVRMTS

Specific function: Unknown

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 8490; Mature: 8490

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTTTRMLTRIKSIYMYINENGTVTTKDLVDEFGITPRTIQRDLNVLQFNELVYSPCRG
CCCHHHHHHHHHHHHEEEECCCCCEEHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCC
KWTTTGKKVRMTS
CCCCCCCEEEECC
>Mature Secondary Structure
MKPTTTRMLTRIKSIYMYINENGTVTTKDLVDEFGITPRTIQRDLNVLQFNELVYSPCRG
CCCHHHHHHHHHHHHEEEECCCCCEEHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCC
KWTTTGKKVRMTS
CCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]