Click here to switch to the map view.

The map label for this gene is pepS [H]

Identifier: 49187572

GI number: 49187572

Start: 4479362

End: 4480477

Strand: Direct

Name: pepS [H]

Synonym: BAS4579

Alternate gene names: 49187572

Gene position: 4479362-4480477 (Clockwise)

Preceding gene: 49187567

Following gene: 49187585

Centisome position: 85.67

GC content: 40.5

Gene sequence:

>1116_bases
ATGAAAGATCCACGCATTGAAAAGTTAGCATACAATTTAATTAACTACTCTATTCGCTTACAAAAAGGCGAAAAAGTATT
AATTGAAAACTTTGGCTTACAAAAAGAACTTGTAACTGCACTTGTAAAAGAAGCATATGCAGCTGGTGGTTTCCCATTCG
TTTCTTTAAAAGATCATCAAGTAGATCGCTCTTTATTAATGGGTGCTACTGAAGAACATTTCGAACAAATCGCAGCGTAT
GAAGCAAGCGTAATGAAAGATATGGACGCTTATATCGGTCTTCGCTCTGGTGATAACATTAACGAACAAGCTGACGTACC
AAGTGAGAGAATGCAAATTCACGGTCAAACAGTTGGTAAGAAAGTTCATAGAGACATCCGCGTTCCAAAAACACGCTGGG
TTGTTCTTCGCTACCCAAATGCTTCTATGGCACAGCTTGCGAAAATGAGCACAGAAGCTTTCGAAGACTTCTACTTCGAA
GTATGTAACTTAGACTACGGTAAAATGGATAAGGCGATGGATAGCCTTGTTACATTAATGAATAAAACAGATAAAGTGCG
CCTAACTGGACCTGGAACTGACTTAACATTCTCTATTAAAGACATTCCAGCAATTAAATGCTCAGGTCATTTAAACATTC
CAGACGGTGAAGTATACTCTGCACCCGTTCGTGATTCTGTTAACGGTACAGTTTCTTACAACACGCCATCTCCTTACAAC
GGTTATACATTTGAAAATGTACAACTTAAGTTCGAGAACGGCCAAATCGTTGAAGCAACTGCAAACGATACAGAACGCAT
TAACAAAATCTTCGATATAGACGAAGGCGCACGCTACGTTGGTGAGTTCGCAATCGGCGTAAACCCATACATCTTGCATC
CAATGGGAGATATCCTATTCGATGAAAAAATCGATGGCAGCTTCCACTTCACTCCTGGACAAGCTTACGACGATGCATGG
AACGGTAACAACTCGAACATTCACTGGGATTTAGTATGCATCCAACGCCCTGAATACGGCGGCGGTGAAATTTACTTCGA
CGACGTACTAATCCGTAAAGACGGACGCTTCGTTGTACCTGAATTAGAAGCTTTAAATCCAGAGAACTTAAAATAA

Upstream 100 bases:

>100_bases
TTTCATACTTATTCGTTAACTTTAACATAAATCATTCAACAAATTCCACTAAGTAGGTTACAATAGGAGAGGATACATAA
TTAGTAGGGAGGCTTTACAT

Downstream 100 bases:

>100_bases
TAATAAAAACGCTCGGAGTTTTCTCTGAGCGTTTTTTTAATATTTTAATAAGTCTTTCGCCACATCTTCTGGCACTTTAA
AACTCATTTTCTTATTTTTC

Product: aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQVDRSLLMGATEEHFEQIAAY
EASVMKDMDAYIGLRSGDNINEQADVPSERMQIHGQTVGKKVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFE
VCNLDYGKMDKAMDSLVTLMNKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN
GYTFENVQLKFENGQIVEATANDTERINKIFDIDEGARYVGEFAIGVNPYILHPMGDILFDEKIDGSFHFTPGQAYDDAW
NGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFVVPELEALNPENLK

Sequences:

>Translated_371_residues
MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQVDRSLLMGATEEHFEQIAAY
EASVMKDMDAYIGLRSGDNINEQADVPSERMQIHGQTVGKKVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFE
VCNLDYGKMDKAMDSLVTLMNKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN
GYTFENVQLKFENGQIVEATANDTERINKIFDIDEGARYVGEFAIGVNPYILHPMGDILFDEKIDGSFHFTPGQAYDDAW
NGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFVVPELEALNPENLK
>Mature_371_residues
MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQVDRSLLMGATEEHFEQIAAY
EASVMKDMDAYIGLRSGDNINEQADVPSERMQIHGQTVGKKVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFE
VCNLDYGKMDKAMDSLVTLMNKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN
GYTFENVQLKFENGQIVEATANDTERINKIFDIDEGARYVGEFAIGVNPYILHPMGDILFDEKIDGSFHFTPGQAYDDAW
NGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFVVPELEALNPENLK

Specific function: Exhibits a high specificity towards peptides possessing arginine or aromatic amino acids at the N-terminus. Could be involved both in bacterial growth by supplying amino acids [H]

COG id: COG2309

COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M29 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000787 [H]

Pfam domain/function: PF02073 Peptidase_M29 [H]

EC number: NA

Molecular weight: Translated: 41820; Mature: 41820

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQ
CCCCHHHHHHHHHHCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCH
VDRSLLMGATEEHFEQIAAYEASVMKDMDAYIGLRSGDNINEQADVPSERMQIHGQTVGK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHEECHHHHHH
KVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFEVCNLDYGKMDKAMDSLVTLM
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN
CCCCEEEEECCCCCEEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCC
GYTFENVQLKFENGQIVEATANDTERINKIFDIDEGARYVGEFAIGVNPYILHPMGDILF
CEEEEEEEEEECCCEEEEECCCCHHHHHHHHCCCCCHHHHEEEEECCCCEEECCCCHHHC
DEKIDGSFHFTPGQAYDDAWNGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFVVP
CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCEECC
ELEALNPENLK
HHHCCCCCCCC
>Mature Secondary Structure
MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQ
CCCCHHHHHHHHHHCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCH
VDRSLLMGATEEHFEQIAAYEASVMKDMDAYIGLRSGDNINEQADVPSERMQIHGQTVGK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHEECHHHHHH
KVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFEVCNLDYGKMDKAMDSLVTLM
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN
CCCCEEEEECCCCCEEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCC
GYTFENVQLKFENGQIVEATANDTERINKIFDIDEGARYVGEFAIGVNPYILHPMGDILF
CEEEEEEEEEECCCEEEEECCCCHHHHHHHHCCCCCHHHHEEEEECCCCEEECCCCHHHC
DEKIDGSFHFTPGQAYDDAWNGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFVVP
CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCEECC
ELEALNPENLK
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10406960 [H]