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The map label for this gene is ccpA [H]

Identifier: 49187568

GI number: 49187568

Start: 4475675

End: 4476673

Strand: Reverse

Name: ccpA [H]

Synonym: BAS4575

Alternate gene names: 49187568

Gene position: 4476673-4475675 (Counterclockwise)

Preceding gene: 49187569

Following gene: 49187564

Centisome position: 85.62

GC content: 38.44

Gene sequence:

>999_bases
ATGAACGTAACAATATATGATGTAGCGCGCGAAGCGAACGTTTCAATGGCTACCGTATCTCGTGTTGTGAACGGTAACCC
AAATGTAAAGCCTACAACAAGAAAGAAAGTATTAGAAGCAATTGATCGTTTAGGATACCGTCCAAATGCGGTAGCACGTG
GATTAGCAAGTAAGAAGACGACTACAGTAGGTGTTATTATTCCTGATATCTCAAATACGTTTTATGCAGAACTTGCTCGT
GGAATTGAAGATATCGCAACAATGTACAAATATAACATCATTTTAAGTAACTCTGACCAAAACAAAGAGAAAGAGTTCCA
TTTATTAAATACGATGCTTGGAAAACAAGTGGACGGAATTGTTTTCATGGGTGAAGATATTACAGACATTCACATTGAAG
AATTTAAAAAGTCTCCAGTACCAATCGTATTAGCAGCGTCATTTGATGAGCAAAATGAAACGCCATCAGTAAACATTGAT
TATACACAAGCAGCTTACGACGCAATGAAGCACTTTATTGAACAAGGACATAAGCGTATCGGTTTCGTCTCTGGTCCTTT
CATTGATAAAGCGGGAAGCGCGAAGAAATTACAAGGTTATAAAAAAGCTCTAGAAGAAGCAGGTATTTCATATGATGAAA
ATCTTGTAATAGATGGAGATTACACATATGATTCAGGTATCGAAGCATTCGAAAAGCTTTGGGGCCTTGATGAGAAGCCG
TCAGCAATCTTCGTATCTTCTGACGAAATGGCACTAGGTGTAATCCACGCAGCACAAGACGCTGGATTAAACGTACCAAC
TGATGTAGAAGTACTTGGATTCGATAATACACGCCTTGCATTAATGGTTCGTCCGCAACTTTCAACAGTTGTACAACCGA
TGTATGATATCGGTGCAGTAGCAATGCGTCTATTAACAAAGTATATGAACAAAGAAAAAGTGGAAGATCACACTGTTATC
TTACCTCACCGTATCCAATTTAGAGATTCAACGAAGTAA

Upstream 100 bases:

>100_bases
GACGATTGGTGGCATCTGCAAATAGAGTTGATGTCTTTTTTTCATTCAAGTAACCGATACATAAAAATAGATAGCAAAAA
TAGAAGGAGTGTGCGATGAG

Downstream 100 bases:

>100_bases
GTATAAAAAAGCTCACAGCGATTGCTGTGAGCTTTTATTTATATTCAGGATAGTATGTTTGAACTATAGTATCCACCGTT
TCATTTTTCTTAACGTGTAA

Product: catabolite control protein A

Products: NA

Alternate protein names: Glucose-resistance amylase regulator [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISNTFYAELAR
GIEDIATMYKYNIILSNSDQNKEKEFHLLNTMLGKQVDGIVFMGEDITDIHIEEFKKSPVPIVLAASFDEQNETPSVNID
YTQAAYDAMKHFIEQGHKRIGFVSGPFIDKAGSAKKLQGYKKALEEAGISYDENLVIDGDYTYDSGIEAFEKLWGLDEKP
SAIFVSSDEMALGVIHAAQDAGLNVPTDVEVLGFDNTRLALMVRPQLSTVVQPMYDIGAVAMRLLTKYMNKEKVEDHTVI
LPHRIQFRDSTK

Sequences:

>Translated_332_residues
MNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISNTFYAELAR
GIEDIATMYKYNIILSNSDQNKEKEFHLLNTMLGKQVDGIVFMGEDITDIHIEEFKKSPVPIVLAASFDEQNETPSVNID
YTQAAYDAMKHFIEQGHKRIGFVSGPFIDKAGSAKKLQGYKKALEEAGISYDENLVIDGDYTYDSGIEAFEKLWGLDEKP
SAIFVSSDEMALGVIHAAQDAGLNVPTDVEVLGFDNTRLALMVRPQLSTVVQPMYDIGAVAMRLLTKYMNKEKVEDHTVI
LPHRIQFRDSTK
>Mature_332_residues
MNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISNTFYAELAR
GIEDIATMYKYNIILSNSDQNKEKEFHLLNTMLGKQVDGIVFMGEDITDIHIEEFKKSPVPIVLAASFDEQNETPSVNID
YTQAAYDAMKHFIEQGHKRIGFVSGPFIDKAGSAKKLQGYKKALEEAGISYDENLVIDGDYTYDSGIEAFEKLWGLDEKP
SAIFVSSDEMALGVIHAAQDAGLNVPTDVEVLGFDNTRLALMVRPQLSTVVQPMYDIGAVAMRLLTKYMNKEKVEDHTVI
LPHRIQFRDSTK

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (AmyE) and the acetyl-coenzyme A synthetase (AcsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=330, Percent_Identity=36.969696969697, Blast_Score=231, Evalue=4e-62,
Organism=Escherichia coli, GI1787948, Length=329, Percent_Identity=34.0425531914894, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1790194, Length=321, Percent_Identity=32.0872274143302, Blast_Score=181, Evalue=6e-47,
Organism=Escherichia coli, GI1789202, Length=291, Percent_Identity=32.6460481099656, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789068, Length=307, Percent_Identity=32.8990228013029, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1788474, Length=302, Percent_Identity=30.4635761589404, Blast_Score=160, Evalue=9e-41,
Organism=Escherichia coli, GI1787580, Length=329, Percent_Identity=26.7477203647416, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI48994940, Length=304, Percent_Identity=27.3026315789474, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1786540, Length=333, Percent_Identity=27.6276276276276, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1790715, Length=317, Percent_Identity=22.7129337539432, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1787906, Length=261, Percent_Identity=26.4367816091954, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789456, Length=354, Percent_Identity=27.683615819209, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786268, Length=314, Percent_Identity=24.8407643312102, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790689, Length=332, Percent_Identity=22.8915662650602, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36886; Mature: 36886

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKT
CCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCC
TTVGVIIPDISNTFYAELARGIEDIATMYKYNIILSNSDQNKEKEFHLLNTMLGKQVDGI
EEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
VFMGEDITDIHIEEFKKSPVPIVLAASFDEQNETPSVNIDYTQAAYDAMKHFIEQGHKRI
EEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHCHHEE
GFVSGPFIDKAGSAKKLQGYKKALEEAGISYDENLVIDGDYTYDSGIEAFEKLWGLDEKP
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCC
SAIFVSSDEMALGVIHAAQDAGLNVPTDVEVLGFDNTRLALMVRPQLSTVVQPMYDIGAV
CEEEEECCCEEEEEEEEHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHH
AMRLLTKYMNKEKVEDHTVILPHRIQFRDSTK
HHHHHHHHHCHHCCCCCEEEECCEEECCCCCC
>Mature Secondary Structure
MNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKT
CCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCC
TTVGVIIPDISNTFYAELARGIEDIATMYKYNIILSNSDQNKEKEFHLLNTMLGKQVDGI
EEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
VFMGEDITDIHIEEFKKSPVPIVLAASFDEQNETPSVNIDYTQAAYDAMKHFIEQGHKRI
EEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHCHHEE
GFVSGPFIDKAGSAKKLQGYKKALEEAGISYDENLVIDGDYTYDSGIEAFEKLWGLDEKP
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCC
SAIFVSSDEMALGVIHAAQDAGLNVPTDVEVLGFDNTRLALMVRPQLSTVVQPMYDIGAV
CEEEEECCCEEEEEEEEHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHH
AMRLLTKYMNKEKVEDHTVILPHRIQFRDSTK
HHHHHHHHHCHHCCCCCEEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1904524; 9387221; 9384377 [H]