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The map label for this gene is 49187513

Identifier: 49187513

GI number: 49187513

Start: 4429127

End: 4429432

Strand: Direct

Name: 49187513

Synonym: BAS4519

Alternate gene names: NA

Gene position: 4429127-4429432 (Clockwise)

Preceding gene: 49187506

Following gene: 49187514

Centisome position: 84.71

GC content: 29.41

Gene sequence:

>306_bases
TTGTTTACTTTTTGTAAAGTTTTATTTACTTATTACCTAAAAATGGATATAATAAATGTAACAAATTTACAAAAAGGAGA
CTTTGTATATTTGATTAAAAATAAGGTAAAACAATTCCGCGTCGTTAGAGACATCACCCAAGAACAATTAGCTTCCTCTG
TTCAAATCACTAGACAATCCCTCATCGCTATCGAGAAGAATAAATACAACCCGAGTTTAGAATTAGCATTGAAATTATGT
GAGTTTTTCAACTGTAAAGTAGAGGATTTATTTCAATTAGATAAAACTGGGGAGGAAAAAGAATGA

Upstream 100 bases:

>100_bases
TTTGCTCCCCATCCAATCCCCTCTTCGACTTATATTTTTCATTTAATTCCAAATTATCACAAAAAACAACATTGTAACAA
GCTATATTTCACGTAAAGCT

Downstream 100 bases:

>100_bases
AAAATACTTTTAATCAAAAGTTCATTTCACATCTTACTTTTTTAGTGTTAGGATCATCTTTTCTTTATTTCAGTAGTAAT
GACGAAGAAAAGATTAGTTC

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MFTFCKVLFTYYLKMDIINVTNLQKGDFVYLIKNKVKQFRVVRDITQEQLASSVQITRQSLIAIEKNKYNPSLELALKLC
EFFNCKVEDLFQLDKTGEEKE

Sequences:

>Translated_101_residues
MFTFCKVLFTYYLKMDIINVTNLQKGDFVYLIKNKVKQFRVVRDITQEQLASSVQITRQSLIAIEKNKYNPSLELALKLC
EFFNCKVEDLFQLDKTGEEKE
>Mature_101_residues
MFTFCKVLFTYYLKMDIINVTNLQKGDFVYLIKNKVKQFRVVRDITQEQLASSVQITRQSLIAIEKNKYNPSLELALKLC
EFFNCKVEDLFQLDKTGEEKE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11939; Mature: 11939

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTFCKVLFTYYLKMDIINVTNLQKGDFVYLIKNKVKQFRVVRDITQEQLASSVQITRQS
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAIEKNKYNPSLELALKLCEFFNCKVEDLFQLDKTGEEKE
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFTFCKVLFTYYLKMDIINVTNLQKGDFVYLIKNKVKQFRVVRDITQEQLASSVQITRQS
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAIEKNKYNPSLELALKLCEFFNCKVEDLFQLDKTGEEKE
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]