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The map label for this gene is ydbB [H]

Identifier: 49187511

GI number: 49187511

Start: 4428233

End: 4428631

Strand: Reverse

Name: ydbB [H]

Synonym: BAS4516

Alternate gene names: 49187511

Gene position: 4428631-4428233 (Counterclockwise)

Preceding gene: 49187512

Following gene: 49187510

Centisome position: 84.7

GC content: 34.34

Gene sequence:

>399_bases
TTGCGGAGGTGGTGGAGACTAAGTTGTTTTTTCAGAAGAACGACTAATGAAAGGGTGGGACGAAAGATGGAAACTGTGAA
CTTAATAGAATTAACAAAGGACATTCAAGAGCAACATAAAAACTTCGTTGTTTCAAATGTAAATAGTCATTGCTTACGAA
TCGCTGTATTTACTGGTGAATATGATTGGCACTATCATTCTAATTCGGATGAATTATTTATTGTACTAGAGGGAGAATTA
CTTATCGATTTTGAAGATGGAGAAACAGTGGTATTAAAGCCAAATGATTCTATTTTAATTCCAGCGTGTACGATTCATAG
AACGAGAGCATTAAAGAGAACGGTAAATCTTTGTTTTGAAAATATAGAGGCTGATACGATTAAAGTGGAGCAATTATGA

Upstream 100 bases:

>100_bases
GAAAAAGGAATAAAAAATCTTCATCCGCTTCAAGTTCATCAAGCGGATTTGGTGACTATAGTAGCAGTGATTGTAGTAGC
TCAAGTGATAGTGGAGGAGA

Downstream 100 bases:

>100_bases
AAAAATTATCTGTAGCCGAGTATAGAAAAATCCTTCCGATTTTAGAAAGTCATACAAAAACGACGACGTTTGCTTATGCG
GTATGTGATCAAGTGATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRRWWRLSCFFRRTTNERVGRKMETVNLIELTKDIQEQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGEL
LIDFEDGETVVLKPNDSILIPACTIHRTRALKRTVNLCFENIEADTIKVEQL

Sequences:

>Translated_132_residues
MRRWWRLSCFFRRTTNERVGRKMETVNLIELTKDIQEQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGEL
LIDFEDGETVVLKPNDSILIPACTIHRTRALKRTVNLCFENIEADTIKVEQL
>Mature_132_residues
MRRWWRLSCFFRRTTNERVGRKMETVNLIELTKDIQEQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGEL
LIDFEDGETVVLKPNDSILIPACTIHRTRALKRTVNLCFENIEADTIKVEQL

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SchB/CurC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR019780
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 15610; Mature: 15610

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWWRLSCFFRRTTNERVGRKMETVNLIELTKDIQEQHKNFVVSNVNSHCLRIAVFTGE
CCCEEEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEEECC
YDWHYHSNSDELFIVLEGELLIDFEDGETVVLKPNDSILIPACTIHRTRALKRTVNLCFE
EEEEEECCCCCEEEEEECCEEEEECCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH
NIEADTIKVEQL
CCCCCEEEEECC
>Mature Secondary Structure
MRRWWRLSCFFRRTTNERVGRKMETVNLIELTKDIQEQHKNFVVSNVNSHCLRIAVFTGE
CCCEEEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEEECC
YDWHYHSNSDELFIVLEGELLIDFEDGETVVLKPNDSILIPACTIHRTRALKRTVNLCFE
EEEEEECCCCCEEEEEECCEEEEECCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH
NIEADTIKVEQL
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]