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The map label for this gene is yrdA [H]

Identifier: 49187421

GI number: 49187421

Start: 4337047

End: 4337550

Strand: Direct

Name: yrdA [H]

Synonym: BAS4426

Alternate gene names: 49187421

Gene position: 4337047-4337550 (Clockwise)

Preceding gene: 49187420

Following gene: 49187422

Centisome position: 82.95

GC content: 41.87

Gene sequence:

>504_bases
ATGTACCAAACTATTGAAGGCTTCTTACAATCGTGGACATACGAGGCTGAATCTACTCAAAAGATGCTCGATGTACTAAC
AGATGAATCTTTGTCACAAGAAATTGCACCTGGACATTGGATGTTAGGAAGAGTCGCTTGGCATATCGTGACGGCAATTC
CTGTTATACTATCTGGCACAGGGCTAAAGTTTGAAGGAGAAACGAAAGATTATCCTGTTCCAACTTCTGCAAAAACAATT
GCAGCTGAATACCGTAAAGTAAACGCGGCTTTTGTTGAAACACTTCAAAGTAAATGGACTGATAAAGACTTAGCTACTAT
TAATGACTTCTTTGGTCGCCCTATGCCGAATTCTATATTTTTAATGACACTCATCAATCATCAAAATCATCACCGCGGGC
AAATGACGGTTTTAATGCGACAAGCCGGCTTAACAGTTCCTGGTGTGTACGGCCCCGCAAAAGAAGAGTGGGCTGCGGCT
GGAATGGAAGCTCCTAAAATGTAA

Upstream 100 bases:

>100_bases
TTATGTGAGAAGCCTCTTTTTTCATTCATTCTCATAAGCCCGAAGGAAACTATCTTTTTTTCACGAATTTAACCTATGAA
CATAACTAGGAGGGATAACA

Downstream 100 bases:

>100_bases
CGACAAAAAAGACAAGGTGTTTACACATCTTGTCTTTTTCTGTAACTTGTTTCATGTGAAACTATTTTTTCTAAATGGTT
GTTTTATGGAAAAGATAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MYQTIEGFLQSWTYEAESTQKMLDVLTDESLSQEIAPGHWMLGRVAWHIVTAIPVILSGTGLKFEGETKDYPVPTSAKTI
AAEYRKVNAAFVETLQSKWTDKDLATINDFFGRPMPNSIFLMTLINHQNHHRGQMTVLMRQAGLTVPGVYGPAKEEWAAA
GMEAPKM

Sequences:

>Translated_167_residues
MYQTIEGFLQSWTYEAESTQKMLDVLTDESLSQEIAPGHWMLGRVAWHIVTAIPVILSGTGLKFEGETKDYPVPTSAKTI
AAEYRKVNAAFVETLQSKWTDKDLATINDFFGRPMPNSIFLMTLINHQNHHRGQMTVLMRQAGLTVPGVYGPAKEEWAAA
GMEAPKM
>Mature_167_residues
MYQTIEGFLQSWTYEAESTQKMLDVLTDESLSQEIAPGHWMLGRVAWHIVTAIPVILSGTGLKFEGETKDYPVPTSAKTI
AAEYRKVNAAFVETLQSKWTDKDLATINDFFGRPMPNSIFLMTLINHQNHHRGQMTVLMRQAGLTVPGVYGPAKEEWAAA
GMEAPKM

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007837 [H]

Pfam domain/function: PF05163 DinB [H]

EC number: NA

Molecular weight: Translated: 18675; Mature: 18675

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQTIEGFLQSWTYEAESTQKMLDVLTDESLSQEIAPGHWMLGRVAWHIVTAIPVILSGT
CCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GLKFEGETKDYPVPTSAKTIAAEYRKVNAAFVETLQSKWTDKDLATINDFFGRPMPNSIF
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEE
LMTLINHQNHHRGQMTVLMRQAGLTVPGVYGPAKEEWAAAGMEAPKM
EEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MYQTIEGFLQSWTYEAESTQKMLDVLTDESLSQEIAPGHWMLGRVAWHIVTAIPVILSGT
CCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GLKFEGETKDYPVPTSAKTIAAEYRKVNAAFVETLQSKWTDKDLATINDFFGRPMPNSIF
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEE
LMTLINHQNHHRGQMTVLMRQAGLTVPGVYGPAKEEWAAAGMEAPKM
EEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]