Definition Bacillus anthracis str. Sterne chromosome, complete genome.
Accession NC_005945
Length 5,228,663

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The map label for this gene is yfmC [H]

Identifier: 49187419

GI number: 49187419

Start: 4333916

End: 4334890

Strand: Direct

Name: yfmC [H]

Synonym: BAS4424

Alternate gene names: 49187419

Gene position: 4333916-4334890 (Clockwise)

Preceding gene: 49187410

Following gene: 49187420

Centisome position: 82.89

GC content: 33.95

Gene sequence:

>975_bases
ATGAAGAAAATTCTCAGTATTTTCATAGTAGTTTTTCTATTCGCTGTTGGATGCGGACAGCAAAAAGAGGAGAAAAAAGA
AACAAAAGCGGACAATAAAAATCAAGCTATAACAATTAAACACGCTGAAGGGGAAACGAAGTTAGATAAACCAGCGAAAA
AAGTAGTTGTACTTGAATGGGTATATTCAGAAGACTTATTAGCACTTGGTGTTCAGCCAGTAGGGATGGCAGACATTAAG
AATTATAATAAATGGGTAAATACAAAAACAAAACCGAGTAAAGATGTTGTAGATGTCGGGACACGTCAACAACCAAACTT
AGAAGAAATTAGCCGTTTAAAACCAGATTTAATTATCACAGCTTCATTCCGTGGTAAAGCAATTAAAAATGAATTAGAAC
AAATTGCACCAACAGTTATGTTTGATCCATCAACAAGCAATAACGATCACTTTGCTGAAATGACAGAAACATTTAAACAA
ATTGCAAAAGCAGTTGGAAAAGAAGAAGAAGGTAAAAAAGTATTAGCTGATATGGATAAAGCATTCGCTGATGCAAAAGC
AAAAATTGAAAAAGCAGACTTAAAAGATAAAAACATCGCAATGGCACAAGCATTTACTGCTAAAAATGTGCCAACATTCC
GTATCTTAACTGACAATTCTTTAGCTTTACAAGTTACAAAAAAATTAGGTTTAACAAATACTTTTGAAGCAGGAAAATCT
GAGCCTGATGGTTTCAAACAAACAACTGTGGAATCATTACAAAGTGTACAAGATTCAAACTTCATTTACATTGTAGCGGA
TGAAGATAACATTTTTGACACGCAACTAAAAGGCAACCCTGCTTGGGAAGAATTAAAGTTTAAAAAAGAAAACAAAATGT
ATAAATTAAAAGGCGACACTTGGATTTTCGGTGGTCCTGAGTCTGCAACATCTTTAGCAACACAAGTAGCAGATGTAATG
ACAGCGAAGAAGTGA

Upstream 100 bases:

>100_bases
GACACTTAAAATATCCTCATAGTATAATTTGGGTGTTGTAATTGATAACTATTTTCATTTATGGTGCTAGTTACAAAAAT
ACTTAATTTGGGGGCAGAAG

Downstream 100 bases:

>100_bases
TTACACGATGAATAACTTACAACATACACTTCGAGCAAGTCTTGTATTCGGAGGAGGAGGAGCTCTCTTGCTCCTCCTTT
TCTTTATTCATATCGGACAA

Product: iron compound ABC transporter iron compound-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: Ferric-citrate-binding protein [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKKILSIFIVVFLFAVGCGQQKEEKKETKADNKNQAITIKHAEGETKLDKPAKKVVVLEWVYSEDLLALGVQPVGMADIK
NYNKWVNTKTKPSKDVVDVGTRQQPNLEEISRLKPDLIITASFRGKAIKNELEQIAPTVMFDPSTSNNDHFAEMTETFKQ
IAKAVGKEEEGKKVLADMDKAFADAKAKIEKADLKDKNIAMAQAFTAKNVPTFRILTDNSLALQVTKKLGLTNTFEAGKS
EPDGFKQTTVESLQSVQDSNFIYIVADEDNIFDTQLKGNPAWEELKFKKENKMYKLKGDTWIFGGPESATSLATQVADVM
TAKK

Sequences:

>Translated_324_residues
MKKILSIFIVVFLFAVGCGQQKEEKKETKADNKNQAITIKHAEGETKLDKPAKKVVVLEWVYSEDLLALGVQPVGMADIK
NYNKWVNTKTKPSKDVVDVGTRQQPNLEEISRLKPDLIITASFRGKAIKNELEQIAPTVMFDPSTSNNDHFAEMTETFKQ
IAKAVGKEEEGKKVLADMDKAFADAKAKIEKADLKDKNIAMAQAFTAKNVPTFRILTDNSLALQVTKKLGLTNTFEAGKS
EPDGFKQTTVESLQSVQDSNFIYIVADEDNIFDTQLKGNPAWEELKFKKENKMYKLKGDTWIFGGPESATSLATQVADVM
TAKK
>Mature_324_residues
MKKILSIFIVVFLFAVGCGQQKEEKKETKADNKNQAITIKHAEGETKLDKPAKKVVVLEWVYSEDLLALGVQPVGMADIK
NYNKWVNTKTKPSKDVVDVGTRQQPNLEEISRLKPDLIITASFRGKAIKNELEQIAPTVMFDPSTSNNDHFAEMTETFKQ
IAKAVGKEEEGKKVLADMDKAFADAKAKIEKADLKDKNIAMAQAFTAKNVPTFRILTDNSLALQVTKKLGLTNTFEAGKS
EPDGFKQTTVESLQSVQDSNFIYIVADEDNIFDTQLKGNPAWEELKFKKENKMYKLKGDTWIFGGPESATSLATQVADVM
TAKK

Specific function: Part of the ABC transporter complex yfmCDEF involved in citrate-dependent Fe(3+) import. Binds citrate-dependent Fe(3+) and delivers it to the surface of yfmDE (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=270, Percent_Identity=28.5185185185185, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786346, Length=257, Percent_Identity=24.9027237354086, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36075; Mature: 36075

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILSIFIVVFLFAVGCGQQKEEKKETKADNKNQAITIKHAEGETKLDKPAKKVVVLEW
CHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEE
VYSEDLLALGVQPVGMADIKNYNKWVNTKTKPSKDVVDVGTRQQPNLEEISRLKPDLIIT
ECCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHCCCCEEEE
ASFRGKAIKNELEQIAPTVMFDPSTSNNDHFAEMTETFKQIAKAVGKEEEGKKVLADMDK
ECCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AFADAKAKIEKADLKDKNIAMAQAFTAKNVPTFRILTDNSLALQVTKKLGLTNTFEAGKS
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEEHHHCCCCCCCCCCCC
EPDGFKQTTVESLQSVQDSNFIYIVADEDNIFDTQLKGNPAWEELKFKKENKMYKLKGDT
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCEEEECCCE
WIFGGPESATSLATQVADVMTAKK
EEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKILSIFIVVFLFAVGCGQQKEEKKETKADNKNQAITIKHAEGETKLDKPAKKVVVLEW
CHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEE
VYSEDLLALGVQPVGMADIKNYNKWVNTKTKPSKDVVDVGTRQQPNLEEISRLKPDLIIT
ECCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHCCCCEEEE
ASFRGKAIKNELEQIAPTVMFDPSTSNNDHFAEMTETFKQIAKAVGKEEEGKKVLADMDK
ECCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AFADAKAKIEKADLKDKNIAMAQAFTAKNVPTFRILTDNSLALQVTKKLGLTNTFEAGKS
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEEHHHCCCCCCCCCCCC
EPDGFKQTTVESLQSVQDSNFIYIVADEDNIFDTQLKGNPAWEELKFKKENKMYKLKGDT
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCEEEECCCE
WIFGGPESATSLATQVADVMTAKK
EEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]