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The map label for this gene is ywdJ [H]

Identifier: 49187381

GI number: 49187381

Start: 4297350

End: 4298645

Strand: Reverse

Name: ywdJ [H]

Synonym: BAS4386

Alternate gene names: 49187381

Gene position: 4298645-4297350 (Counterclockwise)

Preceding gene: 49187382

Following gene: 49187380

Centisome position: 82.21

GC content: 35.8

Gene sequence:

>1296_bases
ATGAAAAATTTGGACAATCAACATAACCAAAATCATATTATGGGAACTTTGCAATGGTTTATATTTTTATTAGCGAATTC
AATCGCATTACCAATTGTCGTTGGCGGATTATTTCATCTTACGACGGAAGAAATATTTTATTTAATGCAGCGTACATTTT
TTGTAGTTGGTATATCTTCTTTTTTACAAGGATGGCTTGGACATAGACTCCCAATTGCGGACGGACCAGCTGGATCTTGG
GTTGGCGTATTTACTGTACTTGCTTACGCAACGGCCGGACAAGATCAATTACATAGTACGTTGCAAATTTTAGAATTAGG
AATGATAATTTCCGGTGTTATTTTAATAGGATTAGGCGTAACAGGTTTTATCGGACGTATTTTATTTTTATTTACGCCGA
TTGTGACAGGGACGTTTTTACTTTTATTATGTTTACAATTAAGCGGTGTATTCCTAAAAGGGATGTTAGGAATTACTGCT
ACTGCTTCTCAAATTGATGGATTTACAGCGATAATTGCGTTTAGTATATTTCTTTTCGTTATTATACTATCTAATTTTGG
AAAAGGTTTTGTCAAAAGTTATGCGGTTTTAATAGGATTAATTAGTGGGTGGATTCTTTTTCTAATTGCAGGAAAAGTGA
CGATTTCATCTCAAGTAACTCATTTTGTGCAACTTCCGCAAATATTTGCTTGGGGACTTCCAAAATGGAATACAGGTATG
GCGGTATCAAGTTTCGTTATGGTATGTATTTTAGTTTCAAATACAGTGGCAGCTATTATTGCAATTAATCAAGCTACTAT
TCAAAAAGGGACTATTGAGCAGAAACAGTTGAAGGATGGTACGTGGGTTGGAGGCATTTCGCATATCATTTCTTCTGTAT
TTTCAACTGTAGGTGTCGTGCCGTTACCGGCAACGGCAGGATTTATACGTTTAACGAAACAAAAATATATACGATCGTTC
TTACTAGCATGTATGTTACTAGTCGTAATGTCGCTGTTTCCAAGTATTATTCGTTATTTAGCATCTTTACCATCCGCTGT
TGCATCTGCGGTTTTAATGGCTTCTTTCGTACAGTTAATTGGAATTGGGTTAAATAATATAAAACAAGTGGAGCTTAATG
AAAGGAATGTAACAATTTTAGGCGTTGCAGTATTATTTGGCAGCGGCGTTATGTTTTTACCGTCTGGAGCGCTCCAGTCC
TTGCCGTCTGTTATGCAATATATATTCGGGAATGGTTTATTTGTAGGTACTGTTGTAAGTATATTGCTAGAACAAATATG
GCGTATCGGGAAATAA

Upstream 100 bases:

>100_bases
AACATTTGGATACGGGAAGAAATCGAAAGGACAAAAAGAGTTGTTTCGAAAAGCTACGTAATAGTATAGCGTGTATTTCT
GTGTGAAATATATGGAAGGG

Downstream 100 bases:

>100_bases
GTGGATACAAAGAGTGTACGCACTGTATAAAAGTCTAAAATAACATGTGAAATAAAGCCCATTTTCATTCACCACCCGCA
CATTTCGTTCATACAATATC

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIADGPAGSW
VGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPIVTGTFLLLLCLQLSGVFLKGMLGITA
TASQIDGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTISSQVTHFVQLPQIFAWGLPKWNTGM
AVSSFVMVCILVSNTVAAIIAINQATIQKGTIEQKQLKDGTWVGGISHIISSVFSTVGVVPLPATAGFIRLTKQKYIRSF
LLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLPSGALQS
LPSVMQYIFGNGLFVGTVVSILLEQIWRIGK

Sequences:

>Translated_431_residues
MKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIADGPAGSW
VGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPIVTGTFLLLLCLQLSGVFLKGMLGITA
TASQIDGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTISSQVTHFVQLPQIFAWGLPKWNTGM
AVSSFVMVCILVSNTVAAIIAINQATIQKGTIEQKQLKDGTWVGGISHIISSVFSTVGVVPLPATAGFIRLTKQKYIRSF
LLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLPSGALQS
LPSVMQYIFGNGLFVGTVVSILLEQIWRIGK
>Mature_431_residues
MKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIADGPAGSW
VGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPIVTGTFLLLLCLQLSGVFLKGMLGITA
TASQIDGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTISSQVTHFVQLPQIFAWGLPKWNTGM
AVSSFVMVCILVSNTVAAIIAINQATIQKGTIEQKQLKDGTWVGGISHIISSVFSTVGVVPLPATAGFIRLTKQKYIRSF
LLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLPSGALQS
LPSVMQYIFGNGLFVGTVVSILLEQIWRIGK

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081750, Length=427, Percent_Identity=25.7611241217799, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI87082181, Length=418, Percent_Identity=20.5741626794258, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 46505; Mature: 46505

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]