Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is mreD [H]
Identifier: 49187343
GI number: 49187343
Start: 4257333
End: 4257878
Strand: Reverse
Name: mreD [H]
Synonym: BAS4348
Alternate gene names: 49187343
Gene position: 4257878-4257333 (Counterclockwise)
Preceding gene: 49187344
Following gene: 49187342
Centisome position: 81.43
GC content: 32.42
Gene sequence:
>546_bases ATGATGAAGATTTTAAAAAGAGCAGCTCTTCCTCTTTTGCTCCTTTTTGTTTTTTTATTTGAAAATATGTTTGCTACTAT TGTTCCAACAGCAGTTTTTTGGAAAGACAGTATAGCAGCACCTCATTTCTTTATCATTGTGTTATGTTTTGTTACTGTGT ACTATAGTCCGGTCCAAGGGATTTATTACGGACTATTATTTGGTTTCTTATTTGATACCGTATACACAGAACTTGTCGGT ATATATATTTTCGCATATCCGATTGTAGCTTATTTAGTATATAGTGTGATGAAGATATTACAATTGAATTTATTTATTGT TGTCTCTATCGTACTAGCTAGCATTGCAGCACTAGAGTATTATGTGTATGGATTTTTAACTTTGTTAGGACGTACTCATA TGTCGGCGTATGTCTTTTTCACAGATCGTCTCCTTTCTACTTTATTGCTAAATGCAATTTTCTTATTCATAGTTTGTTTC CCACTGAGACGATATTTAGTGCGTCTTTCAAAAGCGATGGAAGAAAAAGAAAAAAGGATTTTCTAA
Upstream 100 bases:
>100_bases CTTATGTAAAACCTGCCGCTGATTTAAATGACGTAGAGCATATTATGGTTGCGAAACGTGAAACGCCTTCAGCGCCATTA GAATAGGAGGGGGAGAAGAG
Downstream 100 bases:
>100_bases TTTTATGTCGAATTGAATCGGTGGGGTGAACTTTAGTGGAAGAAAAAAAGCAACAAAATGTAACAATAAAAGGGACAAAA GACGGAATAACGCTTCATTT
Product: rod shape-determining protein MreD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MMKILKRAALPLLLLFVFLFENMFATIVPTAVFWKDSIAAPHFFIIVLCFVTVYYSPVQGIYYGLLFGFLFDTVYTELVG IYIFAYPIVAYLVYSVMKILQLNLFIVVSIVLASIAALEYYVYGFLTLLGRTHMSAYVFFTDRLLSTLLLNAIFLFIVCF PLRRYLVRLSKAMEEKEKRIF
Sequences:
>Translated_181_residues MMKILKRAALPLLLLFVFLFENMFATIVPTAVFWKDSIAAPHFFIIVLCFVTVYYSPVQGIYYGLLFGFLFDTVYTELVG IYIFAYPIVAYLVYSVMKILQLNLFIVVSIVLASIAALEYYVYGFLTLLGRTHMSAYVFFTDRLLSTLLLNAIFLFIVCF PLRRYLVRLSKAMEEKEKRIF >Mature_181_residues MMKILKRAALPLLLLFVFLFENMFATIVPTAVFWKDSIAAPHFFIIVLCFVTVYYSPVQGIYYGLLFGFLFDTVYTELVG IYIFAYPIVAYLVYSVMKILQLNLFIVVSIVLASIAALEYYVYGFLTLLGRTHMSAYVFFTDRLLSTLLLNAIFLFIVCF PLRRYLVRLSKAMEEKEKRIF
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG2891
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007227 [H]
Pfam domain/function: PF04093 MreD [H]
EC number: NA
Molecular weight: Translated: 21025; Mature: 21025
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKILKRAALPLLLLFVFLFENMFATIVPTAVFWKDSIAAPHFFIIVLCFVTVYYSPVQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IYYGLLFGFLFDTVYTELVGIYIFAYPIVAYLVYSVMKILQLNLFIVVSIVLASIAALEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVYGFLTLLGRTHMSAYVFFTDRLLSTLLLNAIFLFIVCFPLRRYLVRLSKAMEEKEKRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC F C >Mature Secondary Structure MMKILKRAALPLLLLFVFLFENMFATIVPTAVFWKDSIAAPHFFIIVLCFVTVYYSPVQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IYYGLLFGFLFDTVYTELVGIYIFAYPIVAYLVYSVMKILQLNLFIVVSIVLASIAALEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVYGFLTLLGRTHMSAYVFFTDRLLSTLLLNAIFLFIVCFPLRRYLVRLSKAMEEKEKRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377 [H]