Click here to switch to the map view.

The map label for this gene is yrrM [H]

Identifier: 49187275

GI number: 49187275

Start: 4189834

End: 4190475

Strand: Reverse

Name: yrrM [H]

Synonym: BAS4279

Alternate gene names: 49187275

Gene position: 4190475-4189834 (Counterclockwise)

Preceding gene: 49187276

Following gene: 49187274

Centisome position: 80.14

GC content: 36.76

Gene sequence:

>642_bases
ATGGAGGATGCAGTTAACGAGTACCTATTATCATTTATTGATCCGAAAGATAAATTAATTCTTGAAATGGAAGACTATGC
GAAAGAAAATCATGTGCCAATTATGGATCGACTTGGAATGGAATTTATGTTGCAATTTTTACGTTTAATTGGACCGAAGA
GTATTTTAGAGCTTGGTACAGCAATTGGCTATTCTAGCATTCGTATGATGCAAGCTATTCCAAATTCTCGCATTGTGACA
GTTGAGCGTAATCGCGATCGATATGAAAAAGCACTTGAATATATAGAACGTTCACCAGTTAAAGAGCGTATTTCCGTTAT
TTACGGTGATGCGTTAGAAACAGGCGAGCAAGTAGAAGAACATGGAACATTTGATGTTATTTTTATTGACGCAGCAAAAG
GACAATATCGTCGCTTTTTTGACTTATATGAACCGTTATTAAATCCTGGTGGCGTAATTATTTCAGATAATGTTATGTAC
CATGGCCTTGTAACGACGAAAGAGAAAATCGAAAACAGACGTACACGTGGTTTAATCCGTCGTATTAAGACGTACAATGA
ATGGCTTATGAACCATGAAGGATATGATACAACGATTTTCCCAATTGGTGATGGAGTAGCTGTTAGTAAAAAGAGAGGGT
GA

Upstream 100 bases:

>100_bases
ACGTACAAGCTAAGGGTAAAGCTGGCTTGTATTTTTATTGCATTCTATGTGTGAAAAGACGTCATAGAGGCACTTCTCCA
TGTAAATAAGGAGGACCATT

Downstream 100 bases:

>100_bases
CCGAGGTATGAAGAAACCTGAATTGTTAGTAACGCCAAAAGCAGTGGCGGATATCGAACCTCTTGCGAAAGCAGGAGTAG
ATGCGGTAATGATCGGCGAG

Product: O-methyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MEDAVNEYLLSFIDPKDKLILEMEDYAKENHVPIMDRLGMEFMLQFLRLIGPKSILELGTAIGYSSIRMMQAIPNSRIVT
VERNRDRYEKALEYIERSPVKERISVIYGDALETGEQVEEHGTFDVIFIDAAKGQYRRFFDLYEPLLNPGGVIISDNVMY
HGLVTTKEKIENRRTRGLIRRIKTYNEWLMNHEGYDTTIFPIGDGVAVSKKRG

Sequences:

>Translated_213_residues
MEDAVNEYLLSFIDPKDKLILEMEDYAKENHVPIMDRLGMEFMLQFLRLIGPKSILELGTAIGYSSIRMMQAIPNSRIVT
VERNRDRYEKALEYIERSPVKERISVIYGDALETGEQVEEHGTFDVIFIDAAKGQYRRFFDLYEPLLNPGGVIISDNVMY
HGLVTTKEKIENRRTRGLIRRIKTYNEWLMNHEGYDTTIFPIGDGVAVSKKRG
>Mature_213_residues
MEDAVNEYLLSFIDPKDKLILEMEDYAKENHVPIMDRLGMEFMLQFLRLIGPKSILELGTAIGYSSIRMMQAIPNSRIVT
VERNRDRYEKALEYIERSPVKERISVIYGDALETGEQVEEHGTFDVIFIDAAKGQYRRFFDLYEPLLNPGGVIISDNVMY
HGLVTTKEKIENRRTRGLIRRIKTYNEWLMNHEGYDTTIFPIGDGVAVSKKRG

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI72001028, Length=219, Percent_Identity=29.6803652968037, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565612, Length=181, Percent_Identity=26.5193370165746, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25148771, Length=181, Percent_Identity=28.1767955801105, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI72001127, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 24673; Mature: 24673

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDAVNEYLLSFIDPKDKLILEMEDYAKENHVPIMDRLGMEFMLQFLRLIGPKSILELGT
CCHHHHHHHHHHCCCCHHEEEEEHHHCCCCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHH
AIGYSSIRMMQAIPNSRIVTVERNRDRYEKALEYIERSPVKERISVIYGDALETGEQVEE
HHCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
HGTFDVIFIDAAKGQYRRFFDLYEPLLNPGGVIISDNVMYHGLVTTKEKIENRRTRGLIR
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCEEEEEEEHHHHHHHHHHHHHHHH
RIKTYNEWLMNHEGYDTTIFPIGDGVAVSKKRG
HHHHHHHHHHCCCCCCEEEEECCCCEECCCCCC
>Mature Secondary Structure
MEDAVNEYLLSFIDPKDKLILEMEDYAKENHVPIMDRLGMEFMLQFLRLIGPKSILELGT
CCHHHHHHHHHHCCCCHHEEEEEHHHCCCCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHH
AIGYSSIRMMQAIPNSRIVTVERNRDRYEKALEYIERSPVKERISVIYGDALETGEQVEE
HHCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
HGTFDVIFIDAAKGQYRRFFDLYEPLLNPGGVIISDNVMYHGLVTTKEKIENRRTRGLIR
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCEEEEEEEHHHHHHHHHHHHHHHH
RIKTYNEWLMNHEGYDTTIFPIGDGVAVSKKRG
HHHHHHHHHHCCCCCCEEEEECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]