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The map label for this gene is ykkB [H]

Identifier: 49187257

GI number: 49187257

Start: 4172363

End: 4172866

Strand: Reverse

Name: ykkB [H]

Synonym: BAS4261

Alternate gene names: 49187257

Gene position: 4172866-4172363 (Counterclockwise)

Preceding gene: 49187258

Following gene: 49187256

Centisome position: 79.81

GC content: 36.9

Gene sequence:

>504_bases
ATGTTTCATACAGATCGTTTACAAATTCGCAAATATACAATGGATGATTTACAGTTCTACGCTTCACTATGGGGAAATGA
GAAGGTAATGCGTTATATTGGAAATGGGACGTTAAAAACATATATGCAGTGTAAAAAAAGTTTGGAGGAGTGGGTGATTC
CTAGCTATAAAAACGGTCTCGGTTTATTTGTATTAATTGAAAAGAAAACGGGAATACGAATTGGTCATGCAGGATTAGTG
AAGCAACAAATAGATGGAAAAGAGGAAATTGAAATTGGTTATTGGTTATTACCTCAGTATTGGGGAAAAGGGTATGCGAA
AGAAGCAGCAGCATTTCGAGATTATGGCTTCCAAGCGTTACGAATGAATAAATTAATCTCTCTTATTAATCCGGACCACC
CCGCCTCAATCTTTGTTGCCAGAAAAACAGGGCTTAGTTATGAGAAAACAACTTCATTTCATGGGATCGATGTTCTCGTT
TATTCTATTAGGCGTGTTGGATGA

Upstream 100 bases:

>100_bases
TATTTGAACGTTAGTTCATTTATAATAGATAGTAACATTTAGTATGGATACAAGACGTGAGCGTGTAATTAAATAAAAAT
TCGTGGGAAGGAGTACAGAA

Downstream 100 bases:

>100_bases
AAAAAGGTAAATTGCATCTTTTGAAGAATGGTATATAAAAATAAAGGGGGGATTACATGTACATTTATCATAATGGACTT
ATTATTCGTGAGGGAACGAA

Product: acetyltransferase

Products: Coenzyme A; H+; N8-Acetylspermidine [C]

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MFHTDRLQIRKYTMDDLQFYASLWGNEKVMRYIGNGTLKTYMQCKKSLEEWVIPSYKNGLGLFVLIEKKTGIRIGHAGLV
KQQIDGKEEIEIGYWLLPQYWGKGYAKEAAAFRDYGFQALRMNKLISLINPDHPASIFVARKTGLSYEKTTSFHGIDVLV
YSIRRVG

Sequences:

>Translated_167_residues
MFHTDRLQIRKYTMDDLQFYASLWGNEKVMRYIGNGTLKTYMQCKKSLEEWVIPSYKNGLGLFVLIEKKTGIRIGHAGLV
KQQIDGKEEIEIGYWLLPQYWGKGYAKEAAAFRDYGFQALRMNKLISLINPDHPASIFVARKTGLSYEKTTSFHGIDVLV
YSIRRVG
>Mature_167_residues
MFHTDRLQIRKYTMDDLQFYASLWGNEKVMRYIGNGTLKTYMQCKKSLEEWVIPSYKNGLGLFVLIEKKTGIRIGHAGLV
KQQIDGKEEIEIGYWLLPQYWGKGYAKEAAAFRDYGFQALRMNKLISLINPDHPASIFVARKTGLSYEKTTSFHGIDVLV
YSIRRVG

Specific function: Regulates Polyamine Concentration By Their Degradation. Acts On Spermidine, Forming N(1)- And N(8)-Acetylspermidine. [C]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.57 [C]

Molecular weight: Translated: 19294; Mature: 19294

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHTDRLQIRKYTMDDLQFYASLWGNEKVMRYIGNGTLKTYMQCKKSLEEWVIPSYKNGL
CCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
GLFVLIEKKTGIRIGHAGLVKQQIDGKEEIEIGYWLLPQYWGKGYAKEAAAFRDYGFQAL
EEEEEEECCCCEEECCCHHHHHHCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHCCHHHH
RMNKLISLINPDHPASIFVARKTGLSYEKTTSFHGIDVLVYSIRRVG
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFHTDRLQIRKYTMDDLQFYASLWGNEKVMRYIGNGTLKTYMQCKKSLEEWVIPSYKNGL
CCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
GLFVLIEKKTGIRIGHAGLVKQQIDGKEEIEIGYWLLPQYWGKGYAKEAAAFRDYGFQAL
EEEEEEECCCCEEECCCHHHHHHCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHCCHHHH
RMNKLISLINPDHPASIFVARKTGLSYEKTTSFHGIDVLVYSIRRVG
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; Spermidine [C]

Specific reaction: Acetyl-CoA + Spermidine --> Coenzyme A + H+ + N8-Acetylspermidine [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]