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The map label for this gene is catD [H]

Identifier: 49187253

GI number: 49187253

Start: 4170221

End: 4170625

Strand: Reverse

Name: catD [H]

Synonym: BAS4257

Alternate gene names: 49187253

Gene position: 4170625-4170221 (Counterclockwise)

Preceding gene: 49187255

Following gene: 49187252

Centisome position: 79.76

GC content: 35.8

Gene sequence:

>405_bases
ATGAATCAACATATTGGTAACTTAATTATTCGTATCGTGTTAGGGGTAACATTCTTTATGCACGGTTTAACAAAATTCCA
ATCGGGAATTGACAATATTGCAGGGTGGTTCACAAGCATTGGTTTACCAGGAGGACTTGCATACGGTGTAGCAACAGTTG
AATTAGTTGGCGGTCTATTATTAATTCTAGGTTTAGGTGTAAGATATATTGGATTATTATTTGCACTAGTTATGGTTGGA
GCAATTGTAAAAGTAAAATGGTCAGCTGGTTTATTAGGAGATGGAAAAAATCCTGGCTTCGAATTAGAGCTTGCATTACT
AGCAATGGGGGCGTACTTATTTGTTGCGAAAGCGGATGGTTTTGTAGATAATTTCTTAAAAGAGAAAATGTCAAAGAAGA
ACTAA

Upstream 100 bases:

>100_bases
ATTTTCCCAGTGAAAATGAATTGACGAATAAAAAAATTAGTGTATGTTTTGTAATGTAAATAAAAGTTTTGTATAAGAAA
ACTATAAAGGAGAGAAGGAA

Downstream 100 bases:

>100_bases
TTTAAATGGGAGGCTAACAAGATGAGTTTTCAACTTCATCCCGATACAACACTTGATGTTGTTCATTTATATGTATCAAA
TATAAAGAAATCACTAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNQHIGNLIIRIVLGVTFFMHGLTKFQSGIDNIAGWFTSIGLPGGLAYGVATVELVGGLLLILGLGVRYIGLLFALVMVG
AIVKVKWSAGLLGDGKNPGFELELALLAMGAYLFVAKADGFVDNFLKEKMSKKN

Sequences:

>Translated_134_residues
MNQHIGNLIIRIVLGVTFFMHGLTKFQSGIDNIAGWFTSIGLPGGLAYGVATVELVGGLLLILGLGVRYIGLLFALVMVG
AIVKVKWSAGLLGDGKNPGFELELALLAMGAYLFVAKADGFVDNFLKEKMSKKN
>Mature_134_residues
MNQHIGNLIIRIVLGVTFFMHGLTKFQSGIDNIAGWFTSIGLPGGLAYGVATVELVGGLLLILGLGVRYIGLLFALVMVG
AIVKVKWSAGLLGDGKNPGFELELALLAMGAYLFVAKADGFVDNFLKEKMSKKN

Specific function: Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14256; Mature: 14256

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHIGNLIIRIVLGVTFFMHGLTKFQSGIDNIAGWFTSIGLPGGLAYGVATVELVGGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LILGLGVRYIGLLFALVMVGAIVKVKWSAGLLGDGKNPGFELELALLAMGAYLFVAKADG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
FVDNFLKEKMSKKN
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNQHIGNLIIRIVLGVTFFMHGLTKFQSGIDNIAGWFTSIGLPGGLAYGVATVELVGGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LILGLGVRYIGLLFALVMVGAIVKVKWSAGLLGDGKNPGFELELALLAMGAYLFVAKADG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
FVDNFLKEKMSKKN
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377 [H]