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The map label for this gene is ywaC [H]

Identifier: 49187238

GI number: 49187238

Start: 4155004

End: 4155654

Strand: Direct

Name: ywaC [H]

Synonym: BAS4242

Alternate gene names: 49187238

Gene position: 4155004-4155654 (Clockwise)

Preceding gene: 49187234

Following gene: 49187241

Centisome position: 79.47

GC content: 30.26

Gene sequence:

>651_bases
ATGGAATATAATCAATCAACAGTTAACTACTGGAAAGCTTTTGTACTACCATATACATTTGCTTTAGAAGAGTTAAAAAC
TAAATTTGAAATTATGAACCGGGAAGCCCAATTTTTAGAGGATTACAACCCGTTTGAACATATAAAAACAAGATTAAAAC
AACCTGAAAGTATTATTAAAAAACTTGAGCGTAAAAATTTATTACCGACAGTTGAAAATGCGCAAACGCATTTACAAGAC
ATCATCGGCATTCGTATTACATGTTGCTTCGTAGAAGATATCTATCATTTAAAAAATGTCATTCAAAAACGTGAAGATAT
GGAAATCATAGAAGTAAAAGATTATATCGCTAATCCAAAAAAAAATGGCTATAAAAGTTTACACATGATTATCAAATACC
CTTTATCACTAAATTCTGGTACAAAAGAAGTCTTTGCAGAAATTCAATTACGTACGCTTGCAATGGACTTTTGGGCAAGT
TTAGAACATAAACTTTATTATAAATATGAAGGAAAAATACCTGAGTATTTAAAAGATGAACTACATGATGCAGCAATGAA
AGCTGAAGATCTCGATAATAAAATGGCAACCATTCGCCAAGATATTGATGATATCGAAGCATGCTCAAATCAAATTATGT
TACCACTATAA

Upstream 100 bases:

>100_bases
TATCGCTTTATGATCTCATCATTTGCTGCTTGCGCTTATATGCTTTGGTATTTAGTATAATAACAACCTCACTTGTAAAT
AGGAAAAGGTGTGTATATAA

Downstream 100 bases:

>100_bases
AAAAAGGTTCTCGCCAATGAGAACCTTTTTTGCTATTTACGAAAAGTTCTACTTTATTTCTTCTCTATCGTGCGAACCTC
TTCAATTTTCCAACCATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MEYNQSTVNYWKAFVLPYTFALEELKTKFEIMNREAQFLEDYNPFEHIKTRLKQPESIIKKLERKNLLPTVENAQTHLQD
IIGIRITCCFVEDIYHLKNVIQKREDMEIIEVKDYIANPKKNGYKSLHMIIKYPLSLNSGTKEVFAEIQLRTLAMDFWAS
LEHKLYYKYEGKIPEYLKDELHDAAMKAEDLDNKMATIRQDIDDIEACSNQIMLPL

Sequences:

>Translated_216_residues
MEYNQSTVNYWKAFVLPYTFALEELKTKFEIMNREAQFLEDYNPFEHIKTRLKQPESIIKKLERKNLLPTVENAQTHLQD
IIGIRITCCFVEDIYHLKNVIQKREDMEIIEVKDYIANPKKNGYKSLHMIIKYPLSLNSGTKEVFAEIQLRTLAMDFWAS
LEHKLYYKYEGKIPEYLKDELHDAAMKAEDLDNKMATIRQDIDDIEACSNQIMLPL
>Mature_216_residues
MEYNQSTVNYWKAFVLPYTFALEELKTKFEIMNREAQFLEDYNPFEHIKTRLKQPESIIKKLERKNLLPTVENAQTHLQD
IIGIRITCCFVEDIYHLKNVIQKREDMEIIEVKDYIANPKKNGYKSLHMIIKYPLSLNSGTKEVFAEIQLRTLAMDFWAS
LEHKLYYKYEGKIPEYLKDELHDAAMKAEDLDNKMATIRQDIDDIEACSNQIMLPL

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 25590; Mature: 25590

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNQSTVNYWKAFVLPYTFALEELKTKFEIMNREAQFLEDYNPFEHIKTRLKQPESIIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
KLERKNLLPTVENAQTHLQDIIGIRITCCFVEDIYHLKNVIQKREDMEIIEVKDYIANPK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
KNGYKSLHMIIKYPLSLNSGTKEVFAEIQLRTLAMDFWASLEHKLYYKYEGKIPEYLKDE
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH
LHDAAMKAEDLDNKMATIRQDIDDIEACSNQIMLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEYNQSTVNYWKAFVLPYTFALEELKTKFEIMNREAQFLEDYNPFEHIKTRLKQPESIIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
KLERKNLLPTVENAQTHLQDIIGIRITCCFVEDIYHLKNVIQKREDMEIIEVKDYIANPK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
KNGYKSLHMIIKYPLSLNSGTKEVFAEIQLRTLAMDFWASLEHKLYYKYEGKIPEYLKDE
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH
LHDAAMKAEDLDNKMATIRQDIDDIEACSNQIMLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]