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The map label for this gene is yqeI [H]

Identifier: 49187227

GI number: 49187227

Start: 4145949

End: 4146314

Strand: Reverse

Name: yqeI [H]

Synonym: BAS4231

Alternate gene names: 49187227

Gene position: 4146314-4145949 (Counterclockwise)

Preceding gene: 49187228

Following gene: 49187226

Centisome position: 79.3

GC content: 34.43

Gene sequence:

>366_bases
GTGGACAGGTTGCGTACCGAATATCGAACGAATGAAACAATTAGTTATAAGAAAGCTTGGAGGCTAACATATATGTTAAC
AGGAAAACAAAAAAGATTTTTACGTGCACAAGCACATCATTTAACACCAATTTTTCAAGTAGGAAAAGGCGGAGTAAATG
AAAATATGATTAAACAAATTGCAGATACTTTAGAAGCTCGTGAGTTATTTAAAGTAAGTGTGCTACAAAACTGTGAATTC
GATCGCCGTGAAGTTGCAGAAGAACTTGCAAAAGGTGCACGTGCTGAAATCGTTCAAGTAATTGGAAGTACAATTGTTTT
ATACAAAGAATCAAGAGAAAACAAGCAAATTAAACTTCCTCGATAA

Upstream 100 bases:

>100_bases
CATTTGAAACGAAAATTTTATGTGAGGCGAAAGAGCAAGGTGCAATCATTCAAAATGGTATTGATATGTTTGTTTATCAA
GGAGCGCTTGCATTTGAAAT

Downstream 100 bases:

>100_bases
AAATAGCATACGCTATTTTTATCACTAGTAATGGTGTAGAGATCGAAACCAATTGAACTTTTATTAACAGTAAACTCTCT
TCGGATGGAAATGAAGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDRLRTEYRTNETISYKKAWRLTYMLTGKQKRFLRAQAHHLTPIFQVGKGGVNENMIKQIADTLEARELFKVSVLQNCEF
DRREVAEELAKGARAEIVQVIGSTIVLYKESRENKQIKLPR

Sequences:

>Translated_121_residues
MDRLRTEYRTNETISYKKAWRLTYMLTGKQKRFLRAQAHHLTPIFQVGKGGVNENMIKQIADTLEARELFKVSVLQNCEF
DRREVAEELAKGARAEIVQVIGSTIVLYKESRENKQIKLPR
>Mature_121_residues
MDRLRTEYRTNETISYKKAWRLTYMLTGKQKRFLRAQAHHLTPIFQVGKGGVNENMIKQIADTLEARELFKVSVLQNCEF
DRREVAEELAKGARAEIVQVIGSTIVLYKESRENKQIKLPR

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=96, Percent_Identity=37.5, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 14140; Mature: 14140

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS01301 UPF0044

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLRTEYRTNETISYKKAWRLTYMLTGKQKRFLRAQAHHLTPIFQVGKGGVNENMIKQI
CCCCHHHHCCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHH
ADTLEARELFKVSVLQNCEFDRREVAEELAKGARAEIVQVIGSTIVLYKESRENKQIKLP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCEEECC
R
C
>Mature Secondary Structure
MDRLRTEYRTNETISYKKAWRLTYMLTGKQKRFLRAQAHHLTPIFQVGKGGVNENMIKQI
CCCCHHHHCCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHH
ADTLEARELFKVSVLQNCEFDRREVAEELAKGARAEIVQVIGSTIVLYKESRENKQIKLP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCEEECC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]