Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is lepA [H]
Identifier: 49187214
GI number: 49187214
Start: 4133419
End: 4135242
Strand: Reverse
Name: lepA [H]
Synonym: BAS4218
Alternate gene names: 49187214
Gene position: 4135242-4133419 (Counterclockwise)
Preceding gene: 49187215
Following gene: 49187213
Centisome position: 79.09
GC content: 37.94
Gene sequence:
>1824_bases ATGAACAAAGAAGAAAGAGCAAAAAGACAGTCCAAAATTCGTAATTTCTCTATCATTGCTCATATTGACCACGGAAAGTC AACGTTAGCAGACCGTATTTTAGAGAAAACAAACGCGTTAACACAACGTGAAATGAAAGCTCAGTTGCTTGACTCTATGG ATTTAGAGCGTGAGCGTGGTATTACAATTAAATTAAACGCAGTACAATTAAACTATAAAGCAAAAGACGGCGAAGAATAT ATTCTTCACTTAATTGATACACCAGGACACGTCGACTTTACGTACGAAGTATCTCGTAGTTTAGCGGCTTGTGAAGGTGC GATTCTTGTAGTAGATGCAGCGCAAGGTATTGAAGCGCAAACGTTAGCAAACGTATACTTAGCGCTTGATAACAATTTAG AAATTTTACCGGTTATTAATAAAATCGACTTACCAAGTGCAGACCCAGAGCGTGTACGCCAAGAAGTAGAAGATGTAATT GGATTAGATGCATCAGAAGCTGTACTTGCTTCTGCAAAAGCTGGGATTGGTATTGAAGAGATTTTAGAACAAATCGTTGA AAAAGTACCAGCACCAACAGGTGATTCAGAAGAACCGTTACAATGTATGATCTTTGACTCTTTATATGATCCATACCGCG GTGTAATTGCGTATATCCGTGTTGTAAATGGAACGGTAAAAGTTGGCGATAAAGTACGTATGATGGCAACTGGAAAAGAA TTTGAAGTAACAGAAGTAGGTGTATTTACACCGAAAACTACGCAACGTGACGAGTTAACAGTAGGTGATGTAGGTTTCTT AGCGGCATCGATTAAAAATGTTGGTGATACACGCGTTGGTGATACGATTACACACGCGAAACGTCCGGCAGCTGAGCCGT TAGCAGGTTATCGTAAATTAAATCCAATGGTATTCTGTGGTTTATATCCGATTGATTCTGCACGTTATAACGACTTACGT GATGCGTTAGAAAAATTAGAATTAAACGATTCTGCACTTGAGTTTGAACCAGAAACATCTCAAGCGCTAGGATTTGGTTT CCGTTGTGGATTCTTAGGACTTCTTCATATGGAAATCCTTCAAGAACGTATTGAACGTGAATTTAAGATTGATTTAATTA CAACAGCGCCAAGCGTTATTTATAAAGTATTCTTAACAAATGGTGAAGACATGATTGTCGATAACCCGTCTAATATGCCG GATCCACAAACAATTGATCGTGTTGAAGAGCCATTTGTTAAAGCTGCAATTATGGTTCCGAACGACTATGTTGGAGCTGT AATGGAAATTTGCCAAGGTAAACGCGGAACATTTATTGATATGCAATATTTAGATGAAACGCGTGTTACATTGACATATG AAATCCCGTTATCAGAAATCGTATATGACTTCTTCGATCAGTTGAAATCAAATACGAAAGGATATGCATCATTTGATTAT GAGTTAATTGGTTACAAACCATCTAAACTTGTAAAAATGGATATTCTTTTAAATTCTGAGCAAGTCGATGCTCTATCATT TATCGTACACCGTGATTCAGCGTATGACCGTGGTAAAGTAATCGTAGAAAAATTAAAAGAATTAATTCCAAGACAGCAGT TCGAAGTGCCAATTCAAGCGACTATCGGAAACAAAGTTGTAGCGCGTTCTACAATTAAGGCGATGCGTAAAAACGTACTT GCGAAATGTTACGGTGGTGACATTTCTCGTAAGCGTAAACTTCTTGACAAGCAAAAAGAAGGTAAAAAACGTATGAAGTC TGTTGGTTCTGTAGAAGTACCGCAAGAAGCATTCATGGCTGTACTGAAAATGGATGACAACTAA
Upstream 100 bases:
>100_bases GTATTGTAAGCAGCACGAGTTTTCATTGAATCTTTGCTGCTCTATTGATATAATCAGTGCTAGTGTATATTGGCGAGACT ATTAGGAGTTGAGAACATAG
Downstream 100 bases:
>100_bases TATTTAGAATGAAAAAAGAAGTCGTTTATGCGGCTTCTTTTTTATGTATAATTACTTTTTAGACATCTGAGTGGCTCTCA TTTACAATAGTGAGAGAGCT
Product: GTP-binding protein LepA
Products: NA
Alternate protein names: EF-4; Ribosomal back-translocase LepA [H]
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MNKEERAKRQSKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAVQLNYKAKDGEEY ILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVI GLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKE FEVTEVGVFTPKTTQRDELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLAGYRKLNPMVFCGLYPIDSARYNDLR DALEKLELNDSALEFEPETSQALGFGFRCGFLGLLHMEILQERIEREFKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMP DPQTIDRVEEPFVKAAIMVPNDYVGAVMEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDY ELIGYKPSKLVKMDILLNSEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQATIGNKVVARSTIKAMRKNVL AKCYGGDISRKRKLLDKQKEGKKRMKSVGSVEVPQEAFMAVLKMDDN
Sequences:
>Translated_607_residues MNKEERAKRQSKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAVQLNYKAKDGEEY ILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVI GLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKE FEVTEVGVFTPKTTQRDELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLAGYRKLNPMVFCGLYPIDSARYNDLR DALEKLELNDSALEFEPETSQALGFGFRCGFLGLLHMEILQERIEREFKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMP DPQTIDRVEEPFVKAAIMVPNDYVGAVMEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDY ELIGYKPSKLVKMDILLNSEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQATIGNKVVARSTIKAMRKNVL AKCYGGDISRKRKLLDKQKEGKKRMKSVGSVEVPQEAFMAVLKMDDN >Mature_607_residues MNKEERAKRQSKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAVQLNYKAKDGEEY ILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVI GLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKE FEVTEVGVFTPKTTQRDELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLAGYRKLNPMVFCGLYPIDSARYNDLR DALEKLELNDSALEFEPETSQALGFGFRCGFLGLLHMEILQERIEREFKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMP DPQTIDRVEEPFVKAAIMVPNDYVGAVMEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDY ELIGYKPSKLVKMDILLNSEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQATIGNKVVARSTIKAMRKNVL AKCYGGDISRKRKLLDKQKEGKKRMKSVGSVEVPQEAFMAVLKMDDN
Specific function: Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- transloc
COG id: COG0481
COG function: function code M; Membrane GTPase LepA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. LepA subfamily [H]
Homologues:
Organism=Homo sapiens, GI157426893, Length=599, Percent_Identity=49.5826377295492, Blast_Score=630, Evalue=1e-180, Organism=Homo sapiens, GI94966754, Length=137, Percent_Identity=45.2554744525547, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI18390331, Length=160, Percent_Identity=39.375, Blast_Score=109, Evalue=8e-24, Organism=Homo sapiens, GI4503483, Length=147, Percent_Identity=37.4149659863946, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI25306287, Length=136, Percent_Identity=45.5882352941176, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI25306283, Length=136, Percent_Identity=45.5882352941176, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI19923640, Length=136, Percent_Identity=45.5882352941176, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI310132016, Length=115, Percent_Identity=43.4782608695652, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI310110807, Length=115, Percent_Identity=43.4782608695652, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI310123363, Length=115, Percent_Identity=43.4782608695652, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI217272894, Length=160, Percent_Identity=33.125, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI217272892, Length=160, Percent_Identity=33.125, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI53729339, Length=243, Percent_Identity=26.7489711934156, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI53729337, Length=243, Percent_Identity=26.7489711934156, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI94966752, Length=97, Percent_Identity=40.2061855670103, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI34147630, Length=257, Percent_Identity=27.2373540856031, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1788922, Length=592, Percent_Identity=58.4459459459459, Blast_Score=719, Evalue=0.0, Organism=Escherichia coli, GI48994988, Length=549, Percent_Identity=29.3260473588342, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1789738, Length=184, Percent_Identity=34.2391304347826, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790835, Length=162, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1789559, Length=255, Percent_Identity=30.1960784313725, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789108, Length=285, Percent_Identity=25.9649122807018, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789737, Length=267, Percent_Identity=28.0898876404494, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790412, Length=267, Percent_Identity=28.0898876404494, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17557151, Length=611, Percent_Identity=42.3895253682488, Blast_Score=513, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17556745, Length=162, Percent_Identity=36.4197530864198, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17533571, Length=144, Percent_Identity=37.5, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71988811, Length=176, Percent_Identity=34.0909090909091, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71988819, Length=176, Percent_Identity=34.0909090909091, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17506493, Length=159, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17552882, Length=145, Percent_Identity=33.1034482758621, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17556456, Length=261, Percent_Identity=29.5019157088123, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25141371, Length=279, Percent_Identity=27.2401433691756, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71994658, Length=135, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323320, Length=598, Percent_Identity=44.8160535117057, Blast_Score=536, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6323098, Length=185, Percent_Identity=37.8378378378378, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324707, Length=145, Percent_Identity=37.9310344827586, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320593, Length=145, Percent_Identity=37.9310344827586, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6322359, Length=114, Percent_Identity=39.4736842105263, Blast_Score=91, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=143, Percent_Identity=37.0629370629371, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324761, Length=246, Percent_Identity=28.0487804878049, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322675, Length=140, Percent_Identity=27.8571428571429, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI78706572, Length=600, Percent_Identity=45.8333333333333, Blast_Score=554, Evalue=1e-158, Organism=Drosophila melanogaster, GI24582462, Length=184, Percent_Identity=38.0434782608696, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=40.4255319148936, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI221458488, Length=151, Percent_Identity=41.7218543046358, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24585711, Length=151, Percent_Identity=33.112582781457, Blast_Score=94, Evalue=4e-19, Organism=Drosophila melanogaster, GI24585713, Length=151, Percent_Identity=33.112582781457, Blast_Score=94, Evalue=4e-19, Organism=Drosophila melanogaster, GI24585709, Length=151, Percent_Identity=33.112582781457, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI21357743, Length=160, Percent_Identity=33.125, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI281363316, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI17864358, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921738, Length=236, Percent_Identity=32.6271186440678, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI28572034, Length=222, Percent_Identity=27.9279279279279, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR006297 - InterPro: IPR013842 - InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF06421 LepA_C [H]
EC number: NA
Molecular weight: Translated: 67936; Mature: 67936
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEERAKRQSKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERG CCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC ITIKLNAVQLNYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQ EEEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHH TLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEE HHEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH ILEQIVEKVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKE HHHHHHHHCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHCCEEEECCEEEEEECCCC FEVTEVGVFTPKTTQRDELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLAGYRKL EEEEEEEEECCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHC NPMVFCGLYPIDSARYNDLRDALEKLELNDSALEFEPETSQALGFGFRCGFLGLLHMEIL CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHH QERIEREFKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMPDPQTIDRVEEPFVKAAIMVP HHHHHHHEEEEEEECCHHHEEEEEEECCCEEEEECCCCCCCCHHHHHHHCCHHEEEEECC NDYVGAVMEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDY CHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEECE ELIGYKPSKLVKMDILLNSEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQA EEECCCCCCEEEEEEEECCCHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEE TIGNKVVARSTIKAMRKNVLAKCYGGDISRKRKLLDKQKEGKKRMKSVGSVEVPQEAFMA ECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLKMDDN HHEECCC >Mature Secondary Structure MNKEERAKRQSKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERG CCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC ITIKLNAVQLNYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQ EEEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHH TLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEE HHEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH ILEQIVEKVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKE HHHHHHHHCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHCCEEEECCEEEEEECCCC FEVTEVGVFTPKTTQRDELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLAGYRKL EEEEEEEEECCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHC NPMVFCGLYPIDSARYNDLRDALEKLELNDSALEFEPETSQALGFGFRCGFLGLLHMEIL CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHH QERIEREFKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMPDPQTIDRVEEPFVKAAIMVP HHHHHHHEEEEEEECCHHHEEEEEEECCCEEEEECCCCCCCCHHHHHHHCCHHEEEEECC NDYVGAVMEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDY CHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEECE ELIGYKPSKLVKMDILLNSEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQA EEECCCCCCEEEEEEEECCCHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEE TIGNKVVARSTIKAMRKNVLAKCYGGDISRKRKLLDKQKEGKKRMKSVGSVEVPQEAFMA ECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLKMDDN HHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA