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The map label for this gene is cccA [H]

Identifier: 49187189

GI number: 49187189

Start: 4107977

End: 4108333

Strand: Reverse

Name: cccA [H]

Synonym: BAS4193

Alternate gene names: 49187189

Gene position: 4108333-4107977 (Counterclockwise)

Preceding gene: 49187190

Following gene: 49187188

Centisome position: 78.57

GC content: 39.5

Gene sequence:

>357_bases
ATGAAACGTAATCCGCTGATTCCGTTCGCTCTTATTGCAGCATTAGGTATTATCGTTATGTTTGTATTTTCATTTCAGGG
GCTAAATAAATCTAAAGAGTTAGCTGATGCAAAAAATGGTGGGAAGCCAGCACAAACAGCATCAAAGCCAGAGGATATTG
TGAAGCAAAGCTGTACGAGCTGCCACGGTGATCAGTTACAAGGAGCGGTAGGACCTAATTTACAAAAAATTGGTGGAAAG
CTTTCGAAAGAAGAGATTCAAGAAGTTATTTCGAAAGGAAAAGGAAACATGCCACCAAATTTAGTTCCAGCTGATCAAGC
CGCTAAAGTAGCTGATTGGCTATCGAAGAAAAAATAA

Upstream 100 bases:

>100_bases
ACGATTAGTAGTTTACTCTTTTCTGATAGAGCGTTTTCAAGTACAATGGAAATGACTGAATCATCTAACTATTTAGGGGT
ATAGAGGGGGGAGAAGAGAT

Downstream 100 bases:

>100_bases
AGTTTTGTGTTACAAGCCTTTTGCTTATGCAAAGGGCTTGTTTTTCTGTATTTTCTAAAATACGATGAGTTATAGAGAAT
GGAATTGTTGTTATGGACTT

Product: cytochrome c-550

Products: NA

Alternate protein names: Cytochrome c A [H]

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKRNPLIPFALIAALGIIVMFVFSFQGLNKSKELADAKNGGKPAQTASKPEDIVKQSCTSCHGDQLQGAVGPNLQKIGGK
LSKEEIQEVISKGKGNMPPNLVPADQAAKVADWLSKKK

Sequences:

>Translated_118_residues
MKRNPLIPFALIAALGIIVMFVFSFQGLNKSKELADAKNGGKPAQTASKPEDIVKQSCTSCHGDQLQGAVGPNLQKIGGK
LSKEEIQEVISKGKGNMPPNLVPADQAAKVADWLSKKK
>Mature_118_residues
MKRNPLIPFALIAALGIIVMFVFSFQGLNKSKELADAKNGGKPAQTASKPEDIVKQSCTSCHGDQLQGAVGPNLQKIGGK
LSKEEIQEVISKGKGNMPPNLVPADQAAKVADWLSKKK

Specific function: Not essential for growth on minimal or rich media [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12555; Mature: 12555

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNPLIPFALIAALGIIVMFVFSFQGLNKSKELADAKNGGKPAQTASKPEDIVKQSCTS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
CHGDQLQGAVGPNLQKIGGKLSKEEIQEVISKGKGNMPPNLVPADQAAKVADWLSKKK
CCCHHCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRNPLIPFALIAALGIIVMFVFSFQGLNKSKELADAKNGGKPAQTASKPEDIVKQSCTS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
CHGDQLQGAVGPNLQKIGGKLSKEEIQEVISKGKGNMPPNLVPADQAAKVADWLSKKK
CCCHHCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2166045; 8969508; 9384377; 8383048 [H]