Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ydjN [C]
Identifier: 49187145
GI number: 49187145
Start: 4063815
End: 4065209
Strand: Direct
Name: ydjN [C]
Synonym: BAS4148
Alternate gene names: 49187145
Gene position: 4063815-4065209 (Clockwise)
Preceding gene: 49187144
Following gene: 49187148
Centisome position: 77.72
GC content: 35.77
Gene sequence:
>1395_bases ATGAATACACTGCTTGTCGGAATTAACGTTGCAGTCATGCTCATTTTAGTTGGCGTATTATATTATATGCAACGTAAGCA TGTATCTTTTAATAAACGTGTATTTACTGCTTTAGGAATCGGAATTATCTTCGGTCTTATATTACAATTTATTTATGAAC CTACTTCTAAAGTCATTATTGAATCAAATACTTGGTTTGGCTTAATTGGTAGCGGTTATGTGAAATTACTTCAAATGATC GTTATGCCACTTATTTTAGTATCTATCATTTCAGCATTTACAAAATTACAGTTAACGAAAAATCTTGGTAAAATTAGTGG TCTTATTATCGGAATTTTAATTCTTACTACAGGAATTGCTGCAGCTGTCGGTATCGCTGCAAGTGCAGGATTTGATGTAT CTGCAACAGGCCTGCAACAAGGTGATGCAGAATCTGCTCGTCTGAAGCTAGTTGAAGAAAGATTTACTTCTATTGAAAAA ACAACAATTCCAGATAAATTATTAGAACTATTGCCTACAAATCCATTTCTTGATTTAACAGGCGCTCGTCCAACATCAAC AATTTCTGTTGTAATATTTGCAGCATTTATCGGTATCGCCTTTATAGGTGTAAAACGAAAATATCCAGAACAAGCAGAGC TATTTAAGAAAATGCTTGATGCTGTATATGCAATTGTAATGCGTATGGTAACATTAATTTTACGTCTTACTCCATATGGT GTATTAGCTCTTATGGCAAAAACAGTTGCTGGTAGCGACATAAATGCTATTTTAAAACTTGGTAACTTCGTGTTAGCGTC TTACGTAGCACTTATCGTAATGTTCGTTATCCACTTATTATTAATTGCTCTATCTGGTTTAAATCCAATTCAATATTTAA AAAAGGTATTCCCTGTATTAACATTCGCATTCACATCTCGCTCTAGTGCCGGTGCAATGCCATTAAATATTGAAGCACAA AAAGAAAAACTTGGTATTTCTGAAGGAATCGCTAACTTCGCAGCATCATTTGGAGTATCTATCGGACAAAATGGTTGCGC AGGTATTTACCCAGCAATGCTTGCAATGATGGTCGCTCCAACTGTTGGAATTGATCCATTACAACCACAATTTATTTTAA CTTTAATCGCTGTCGTTGCTATTAGCTCATTCGGTGTTGCCGGCGTTGGTGGCGGTGCAACATTCGCAGCATTAATCGTA CTATCTACAATGAACTTACCAATCGGTATTGTCGCTCTTGTTATCTCAGTTGAACCATTAATCGATATGGGTCGTACAGC TCTTAACGTAAGTGGTTCTATGACAGCAGGTCTTATTTCTAGTAAATGGCTTGGTGAATTAGATCAAGATACGTACAATC AAGATGATACAAAAACTGGTGAGATTGCTTCATAA
Upstream 100 bases:
>100_bases CATTTTGCCATCTTTTTTTTAATTCCGGAATTCCCTAGTTGACTTATAGGTTTTATTGATTTATATTCTATATAACAGAT TGGAATTAGGGGGAATCATC
Downstream 100 bases:
>100_bases TAAAAAGGACGCTAACAAAAATGTTAGCGTCCTTTTTTAGTTCTTTTCATCTTCCTCTTTATCTTTTATACATAAGGCAT AACATATTGTTTCAAACACT
Product: sodium:dicarboxylate symporter family protein
Products: NA
Alternate protein names: Transporter of cystine tcyP
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MNTLLVGINVAVMLILVGVLYYMQRKHVSFNKRVFTALGIGIIFGLILQFIYEPTSKVIIESNTWFGLIGSGYVKLLQMI VMPLILVSIISAFTKLQLTKNLGKISGLIIGILILTTGIAAAVGIAASAGFDVSATGLQQGDAESARLKLVEERFTSIEK TTIPDKLLELLPTNPFLDLTGARPTSTISVVIFAAFIGIAFIGVKRKYPEQAELFKKMLDAVYAIVMRMVTLILRLTPYG VLALMAKTVAGSDINAILKLGNFVLASYVALIVMFVIHLLLIALSGLNPIQYLKKVFPVLTFAFTSRSSAGAMPLNIEAQ KEKLGISEGIANFAASFGVSIGQNGCAGIYPAMLAMMVAPTVGIDPLQPQFILTLIAVVAISSFGVAGVGGGATFAALIV LSTMNLPIGIVALVISVEPLIDMGRTALNVSGSMTAGLISSKWLGELDQDTYNQDDTKTGEIAS
Sequences:
>Translated_464_residues MNTLLVGINVAVMLILVGVLYYMQRKHVSFNKRVFTALGIGIIFGLILQFIYEPTSKVIIESNTWFGLIGSGYVKLLQMI VMPLILVSIISAFTKLQLTKNLGKISGLIIGILILTTGIAAAVGIAASAGFDVSATGLQQGDAESARLKLVEERFTSIEK TTIPDKLLELLPTNPFLDLTGARPTSTISVVIFAAFIGIAFIGVKRKYPEQAELFKKMLDAVYAIVMRMVTLILRLTPYG VLALMAKTVAGSDINAILKLGNFVLASYVALIVMFVIHLLLIALSGLNPIQYLKKVFPVLTFAFTSRSSAGAMPLNIEAQ KEKLGISEGIANFAASFGVSIGQNGCAGIYPAMLAMMVAPTVGIDPLQPQFILTLIAVVAISSFGVAGVGGGATFAALIV LSTMNLPIGIVALVISVEPLIDMGRTALNVSGSMTAGLISSKWLGELDQDTYNQDDTKTGEIAS >Mature_464_residues MNTLLVGINVAVMLILVGVLYYMQRKHVSFNKRVFTALGIGIIFGLILQFIYEPTSKVIIESNTWFGLIGSGYVKLLQMI VMPLILVSIISAFTKLQLTKNLGKISGLIIGILILTTGIAAAVGIAASAGFDVSATGLQQGDAESARLKLVEERFTSIEK TTIPDKLLELLPTNPFLDLTGARPTSTISVVIFAAFIGIAFIGVKRKYPEQAELFKKMLDAVYAIVMRMVTLILRLTPYG VLALMAKTVAGSDINAILKLGNFVLASYVALIVMFVIHLLLIALSGLNPIQYLKKVFPVLTFAFTSRSSAGAMPLNIEAQ KEKLGISEGIANFAASFGVSIGQNGCAGIYPAMLAMMVAPTVGIDPLQPQFILTLIAVVAISSFGVAGVGGGATFAALIV LSTMNLPIGIVALVISVEPLIDMGRTALNVSGSMTAGLISSKWLGELDQDTYNQDDTKTGEIAS
Specific function: Mediates uptake of L-cystine, the oxidized form of L- cysteine
COG id: COG1823
COG function: function code R; Predicted Na+/dicarboxylate symporter
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family
Homologues:
Organism=Homo sapiens, GI5032093, Length=388, Percent_Identity=26.0309278350515, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI223468564, Length=279, Percent_Identity=25.8064516129032, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI223468566, Length=259, Percent_Identity=27.027027027027, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI40254478, Length=328, Percent_Identity=28.0487804878049, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI21314632, Length=441, Percent_Identity=24.0362811791383, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI169790839, Length=467, Percent_Identity=24.6252676659529, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4827012, Length=268, Percent_Identity=26.1194029850746, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI194239697, Length=471, Percent_Identity=22.5053078556263, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI66773030, Length=308, Percent_Identity=26.2987012987013, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788024, Length=449, Percent_Identity=54.3429844097996, Blast_Score=454, Evalue=1e-129, Organism=Escherichia coli, GI1789947, Length=447, Percent_Identity=23.7136465324385, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1790514, Length=431, Percent_Identity=24.3619489559165, Blast_Score=103, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71983106, Length=436, Percent_Identity=23.1651376146789, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71983099, Length=436, Percent_Identity=23.1651376146789, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537407, Length=450, Percent_Identity=24, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193206654, Length=467, Percent_Identity=24.4111349036403, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17541374, Length=446, Percent_Identity=24.4394618834081, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI193206505, Length=418, Percent_Identity=22.0095693779904, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71996953, Length=471, Percent_Identity=23.5668789808917, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24583025, Length=404, Percent_Identity=25.4950495049505, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI17137668, Length=404, Percent_Identity=25.4950495049505, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24583023, Length=404, Percent_Identity=25.4950495049505, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TCYP_BACAH (A0RIM4)
Other databases:
- EMBL: CP000485 - RefSeq: YP_896574.1 - ProteinModelPortal: A0RIM4 - EnsemblBacteria: EBBACT00000069572 - GeneID: 4544919 - GenomeReviews: CP000485_GR - KEGG: btl:BALH_3843 - eggNOG: COG1823 - GeneTree: EBGT00070000032022 - HOGENOM: HBG739804 - ProtClustDB: CLSK886937 - BioCyc: BTHU412694:BALH_3843-MONOMER - InterPro: IPR001991 - PANTHER: PTHR11958 - PRINTS: PR00173
Pfam domain/function: PF00375 SDF
EC number: NA
Molecular weight: Translated: 49257; Mature: 49257
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1; PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15abab7c)-; HASH(0x156157e0)-; HASH(0x15e11230)-; HASH(0x166e61e8)-; HASH(0x15b7987c)-; HASH(0x166e3404)-; HASH(0x166e36e0)-; HASH(0x166e5e4c)-; HASH(0x159332c0)-; HASH(0x166b7650)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLVGINVAVMLILVGVLYYMQRKHVSFNKRVFTALGIGIIFGLILQFIYEPTSKVII CCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ESNTWFGLIGSGYVKLLQMIVMPLILVSIISAFTKLQLTKNLGKISGLIIGILILTTGIA ECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVGIAASAGFDVSATGLQQGDAESARLKLVEERFTSIEKTTIPDKLLELLPTNPFLDLT HHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEECC GARPTSTISVVIFAAFIGIAFIGVKRKYPEQAELFKKMLDAVYAIVMRMVTLILRLTPYG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH VLALMAKTVAGSDINAILKLGNFVLASYVALIVMFVIHLLLIALSGLNPIQYLKKVFPVL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TFAFTSRSSAGAMPLNIEAQKEKLGISEGIANFAASFGVSIGQNGCAGIYPAMLAMMVAP HHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC TVGIDPLQPQFILTLIAVVAISSFGVAGVGGGATFAALIVLSTMNLPIGIVALVISVEPL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IDMGRTALNVSGSMTAGLISSKWLGELDQDTYNQDDTKTGEIAS HHCCCHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure MNTLLVGINVAVMLILVGVLYYMQRKHVSFNKRVFTALGIGIIFGLILQFIYEPTSKVII CCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ESNTWFGLIGSGYVKLLQMIVMPLILVSIISAFTKLQLTKNLGKISGLIIGILILTTGIA ECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVGIAASAGFDVSATGLQQGDAESARLKLVEERFTSIEKTTIPDKLLELLPTNPFLDLT HHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEECC GARPTSTISVVIFAAFIGIAFIGVKRKYPEQAELFKKMLDAVYAIVMRMVTLILRLTPYG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH VLALMAKTVAGSDINAILKLGNFVLASYVALIVMFVIHLLLIALSGLNPIQYLKKVFPVL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TFAFTSRSSAGAMPLNIEAQKEKLGISEGIANFAASFGVSIGQNGCAGIYPAMLAMMVAP HHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC TVGIDPLQPQFILTLIAVVAISSFGVAGVGGGATFAALIVLSTMNLPIGIVALVISVEPL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IDMGRTALNVSGSMTAGLISSKWLGELDQDTYNQDDTKTGEIAS HHCCCHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA