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The map label for this gene is yhcW [H]

Identifier: 49187105

GI number: 49187105

Start: 4035631

End: 4036296

Strand: Reverse

Name: yhcW [H]

Synonym: BAS4107

Alternate gene names: 49187105

Gene position: 4036296-4035631 (Counterclockwise)

Preceding gene: 49187106

Following gene: 49187102

Centisome position: 77.2

GC content: 34.38

Gene sequence:

>666_bases
ATGATGAAAGCAATTATTTTTGATTTTGATGGATTAATTGTGGATACAGAAACAATATGGTTTCACTCTTTCAGAGACGC
CGTTCGTGAGTACGGTGGAGATTTACCTTTAGAGGAATTTGCAAAATGTATTGGAACGACAGACGATGTACTGTATGAAT
ATTTAAATGAGCAGTTAAAAGAGAAGTTTGATAAGTATGCATTAAAAGAAAAAGTGAAAAATTTACATAAAGAGAAAATG
AAAATACCAGAAGCTCGTGACGGGGTAAAAGAATACTTAGAAGAAGCGAAAGAAATGGGATTAAAAATCGCATTAGCTTC
CAGTTCCTCTAGAGAATGGGTTATTCCTTTTTTGGAAGAACTACAAATTCGAGATTATTTTGAAGTCATTAAAACGAGAG
AAGATGTTGAGAAGGTAAAACCAGATCCAGCACTTTACCGAGTAGCAATAGAAGATTTAGGAATAGATTCGTCTGAAGCC
GTTGCATTTGAAGACTCGTTAAATGGATTGAAAGCAGCGATTGCAGCGGGATTAACGTGCGTTGTTGTACCGAATGATGT
GACACGTAATTTACCATTTGAAAATCATCACCTTCGAATTGAAAGTATGAAAGATAAAAGTTTGAAAGAAGTAATGCAAA
ATATAAAGAAAGACCGTATCTACTAA

Upstream 100 bases:

>100_bases
TGGAAACACTTCGTGGCGTTCAAAAAGCAAATGAAGAGAAAAGTAATTAAGGGGAACGTACGTCGTTTCCTTTTTTATTT
CAATCGAAAAGGATGGGAGA

Downstream 100 bases:

>100_bases
AAGGAAGCACGGTCTTTCTTTTTGTTTTTTTTACCTTCAATGACAGTTAAATGAGGTTGTTTTCTTTTTCGCTTCAAAGA
AGAAGGATTCCCTTTTTTTC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MMKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHKEKM
KIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEA
VAFEDSLNGLKAAIAAGLTCVVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIY

Sequences:

>Translated_221_residues
MMKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHKEKM
KIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEA
VAFEDSLNGLKAAIAAGLTCVVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIY
>Mature_221_residues
MMKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHKEKM
KIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEA
VAFEDSLNGLKAAIAAGLTCVVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIY

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=215, Percent_Identity=27.906976744186, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787576, Length=196, Percent_Identity=25, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=24.7252747252747, Blast_Score=64, Evalue=9e-12,
Organism=Drosophila melanogaster, GI116008157, Length=191, Percent_Identity=30.3664921465969, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17137324, Length=191, Percent_Identity=26.7015706806283, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25514; Mature: 25514

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLK
CCCEEEEECCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
EKFDKYALKEKVKNLHKEKMKIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEHHHHHH
LQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLNGLKAAIAAGLTC
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCEE
VVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIY
EEECCHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKAIIFDFDGLIVDTETIWFHSFRDAVREYGGDLPLEEFAKCIGTTDDVLYEYLNEQLK
CCCEEEEECCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
EKFDKYALKEKVKNLHKEKMKIPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEHHHHHH
LQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLNGLKAAIAAGLTC
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCEE
VVVPNDVTRNLPFENHHLRIESMKDKSLKEVMQNIKKDRIY
EEECCHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]