Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is spoIVB [H]
Identifier: 49187075
GI number: 49187075
Start: 4010532
End: 4011830
Strand: Reverse
Name: spoIVB [H]
Synonym: BAS4077
Alternate gene names: 49187075
Gene position: 4011830-4010532 (Counterclockwise)
Preceding gene: 49187076
Following gene: 49187074
Centisome position: 76.73
GC content: 36.34
Gene sequence:
>1299_bases GTGAACAAATTGAAATTAGAAAGATTTCGCAAGATAATAGGTATTTGTCTCCTTGTTTCTTTAGTTTTTATTGGGTGTTT TAAACCGCTTCGGACGTTTATTTCATCCCCGAAACAACTTGTTGTTTTTGAAGGACAACAATCAGAAATAGCTTCATTAC CAGTGTTTAAAGCTTCATCTACAGATCGTCATGTGTTTACAGTAAGTTCAAATGAACAAAAACAAGGACTTATGGTAAAT TCTCATCAAAATGGTGAAGCAGATATGGTGTTTCAGCTTGCTGGTTTTCCGGTGAAAAAAGTAAATGTGAGAGTATTAAA AGATTTCAAAGTTATTCCAGGTGGACAATCAATCGGTGTAAAGTTAAACACAAAAGGGGTACTTGTTGTAGGCCATCATT TAATTCAAACTGAAAAAGGGAAAGTATCTCCTGGTGAAACAGCGGGTGTGCAAATTGGAGATATGATTACTGAAATTAAT GGTAAAACAATTGAAAGAATGAGTGATGTAGCACCATTTATTCATAATAGTGGGGAAACAGGCGAACCGCTTAATCTCGT TTTGTTAAGAGATGGAAAGCATATTCGCACTAAGTTAACACCACAAAAAGACAATGGAGAATCTTCTTATCGCATTGGTT TATATATTCGTGATTCGGCAGCTGGAATCGGAACAATGACATTTGTTCATCCTGATTCTATGAAATATGGTGCGCTTGGT CATGTCATTTCTGATAACGATACGAAAAAACCGATTCAAGTCGAAGATGGACAAATTATGCGTTCGACAGTTACATCAAT TGAAAGAGGTAGTCACGGAAATCCAGGAGAGAAATTAGCGAGGTTCTCACCAGATCGTGAAGTGATTGGCAATATTACAA TAAATAGTCCATTTGGTATTTTTGGCAAATTGAATACAAATATGACAAATGGCGTAATGGATAAAGCAATGCCTATTGCA CTATCTCATCAAGTAAAAGAGGGGCCGGCAAAAATATTAACGGTTATTGATCAAGATAAAGTGGAAGCGTTTGATATTGA AGTTGTTAGTACAGTACCGCAAAAGTTTCCGGCAACAAAAGGCATGGTAATAAAAGTAACAGACAAACGTTTATTAGCGA AAACGGGTGGTATCGTACAAGGGATGAGCGGAAGTCCAATTGTACAAAACGGGAAAGTAATTGGTGCTGTTACACATGTA TTTGTAAATGATCCGACATCAGGATATGGTGTTCATATTGAATGGATGTTACATGAAGCTGGAATTAACATTTATGATCA AGAAAGAAAAGCGAGCTAA
Upstream 100 bases:
>100_bases AAATGATGATTTCTTAATTCTTCCGGTTATAAATAAAGCATTGCAAGGAGAGATTAAAAAGTGAAGCCAAGAGGCTGAAT GTGGGGTAGGAGCGAGGAGA
Downstream 100 bases:
>100_bases TTAATAATTAGCTCGCTTTTCTATTGAAAAATTCGTTGAAATTTTGTAAAAGCTCCGCAAGAGGTGTTTTTTGTTGTAAA ATAAAAGGAAAGGGTTGAAC
Product: stage IV sporulation protein B
Products: NA
Alternate protein names: Sporulation factor IV B protease; Stage IV sporulation protein B [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MNKLKLERFRKIIGICLLVSLVFIGCFKPLRTFISSPKQLVVFEGQQSEIASLPVFKASSTDRHVFTVSSNEQKQGLMVN SHQNGEADMVFQLAGFPVKKVNVRVLKDFKVIPGGQSIGVKLNTKGVLVVGHHLIQTEKGKVSPGETAGVQIGDMITEIN GKTIERMSDVAPFIHNSGETGEPLNLVLLRDGKHIRTKLTPQKDNGESSYRIGLYIRDSAAGIGTMTFVHPDSMKYGALG HVISDNDTKKPIQVEDGQIMRSTVTSIERGSHGNPGEKLARFSPDREVIGNITINSPFGIFGKLNTNMTNGVMDKAMPIA LSHQVKEGPAKILTVIDQDKVEAFDIEVVSTVPQKFPATKGMVIKVTDKRLLAKTGGIVQGMSGSPIVQNGKVIGAVTHV FVNDPTSGYGVHIEWMLHEAGINIYDQERKAS
Sequences:
>Translated_432_residues MNKLKLERFRKIIGICLLVSLVFIGCFKPLRTFISSPKQLVVFEGQQSEIASLPVFKASSTDRHVFTVSSNEQKQGLMVN SHQNGEADMVFQLAGFPVKKVNVRVLKDFKVIPGGQSIGVKLNTKGVLVVGHHLIQTEKGKVSPGETAGVQIGDMITEIN GKTIERMSDVAPFIHNSGETGEPLNLVLLRDGKHIRTKLTPQKDNGESSYRIGLYIRDSAAGIGTMTFVHPDSMKYGALG HVISDNDTKKPIQVEDGQIMRSTVTSIERGSHGNPGEKLARFSPDREVIGNITINSPFGIFGKLNTNMTNGVMDKAMPIA LSHQVKEGPAKILTVIDQDKVEAFDIEVVSTVPQKFPATKGMVIKVTDKRLLAKTGGIVQGMSGSPIVQNGKVIGAVTHV FVNDPTSGYGVHIEWMLHEAGINIYDQERKAS >Mature_432_residues MNKLKLERFRKIIGICLLVSLVFIGCFKPLRTFISSPKQLVVFEGQQSEIASLPVFKASSTDRHVFTVSSNEQKQGLMVN SHQNGEADMVFQLAGFPVKKVNVRVLKDFKVIPGGQSIGVKLNTKGVLVVGHHLIQTEKGKVSPGETAGVQIGDMITEIN GKTIERMSDVAPFIHNSGETGEPLNLVLLRDGKHIRTKLTPQKDNGESSYRIGLYIRDSAAGIGTMTFVHPDSMKYGALG HVISDNDTKKPIQVEDGQIMRSTVTSIERGSHGNPGEKLARFSPDREVIGNITINSPFGIFGKLNTNMTNGVMDKAMPIA LSHQVKEGPAKILTVIDQDKVEAFDIEVVSTVPQKFPATKGMVIKVTDKRLLAKTGGIVQGMSGSPIVQNGKVIGAVTHV FVNDPTSGYGVHIEWMLHEAGINIYDQERKAS
Specific function: Plays a central role in the sigma-K checkpoint which coordinates gene expression during the later stages of spore formation. The protease is activated by trans cleavage of the zymogen precursor producing SpoIVB-45 kDa. This undergoes further trimming by c
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Forespore intermembrane space [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase S55 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR014219 - InterPro: IPR008763 [H]
Pfam domain/function: PF00595 PDZ; PF05580 Peptidase_S55 [H]
EC number: =3.4.21.116 [H]
Molecular weight: Translated: 47002; Mature: 47002
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKLERFRKIIGICLLVSLVFIGCFKPLRTFISSPKQLVVFEGQQSEIASLPVFKASS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCEEECCC TDRHVFTVSSNEQKQGLMVNSHQNGEADMVFQLAGFPVKKVNVRVLKDFKVIPGGQSIGV CCCEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEE KLNTKGVLVVGHHLIQTEKGKVSPGETAGVQIGDMITEINGKTIERMSDVAPFIHNSGET EECCCEEEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCC GEPLNLVLLRDGKHIRTKLTPQKDNGESSYRIGLYIRDSAAGIGTMTFVHPDSMKYGALG CCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCC HVISDNDTKKPIQVEDGQIMRSTVTSIERGSHGNPGEKLARFSPDREVIGNITINSPFGI EEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCE FGKLNTNMTNGVMDKAMPIALSHQVKEGPAKILTVIDQDKVEAFDIEVVSTVPQKFPATK EEEECCCCCCCHHHHCCCEEEHHHCCCCCEEEEEEECCCCCEEEEEEHHHHCHHHCCCCC GMVIKVTDKRLLAKTGGIVQGMSGSPIVQNGKVIGAVTHVFVNDPTSGYGVHIEWMLHEA CEEEEEECCEEHHHCCCEEECCCCCCEEECCEEEEEEEEEEECCCCCCCEEEEEEEEEEC GINIYDQERKAS CCCEECCCCCCC >Mature Secondary Structure MNKLKLERFRKIIGICLLVSLVFIGCFKPLRTFISSPKQLVVFEGQQSEIASLPVFKASS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCEEECCC TDRHVFTVSSNEQKQGLMVNSHQNGEADMVFQLAGFPVKKVNVRVLKDFKVIPGGQSIGV CCCEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEE KLNTKGVLVVGHHLIQTEKGKVSPGETAGVQIGDMITEINGKTIERMSDVAPFIHNSGET EECCCEEEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCC GEPLNLVLLRDGKHIRTKLTPQKDNGESSYRIGLYIRDSAAGIGTMTFVHPDSMKYGALG CCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCC HVISDNDTKKPIQVEDGQIMRSTVTSIERGSHGNPGEKLARFSPDREVIGNITINSPFGI EEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCE FGKLNTNMTNGVMDKAMPIALSHQVKEGPAKILTVIDQDKVEAFDIEVVSTVPQKFPATK EEEECCCCCCCHHHHCCCEEEHHHCCCCCEEEEEEECCCCCEEEEEEHHHHCHHHCCCCC GMVIKVTDKRLLAKTGGIVQGMSGSPIVQNGKVIGAVTHVFVNDPTSGYGVHIEWMLHEA CEEEEEECCEEHHHCCCEEECCCCCCEEECCEEEEEEEEEEECCCCCCCEEEEEEEEEEC GINIYDQERKAS CCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2106508; 8969508; 9384377; 11741860 [H]