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The map label for this gene is yqjA [H]

Identifier: 49187054

GI number: 49187054

Start: 3989095

End: 3990063

Strand: Reverse

Name: yqjA [H]

Synonym: BAS4056

Alternate gene names: 49187054

Gene position: 3990063-3989095 (Counterclockwise)

Preceding gene: 49187055

Following gene: 49187053

Centisome position: 76.31

GC content: 33.85

Gene sequence:

>969_bases
ATGTTCAAAATTGGATACCGTACAGTAAAAACAGCAATAGGGACAGGCGCAGCCGTTTTTATTGCCCAGTTATTAGGGTT
AGAATTTTATAGTTCAGCGGGTATTTTAGTTATATTATGTGTACAAAATACGAAACGTAAATCACTTCAAGTATCATTAC
ATCGTTTTTTAGCTTGTGTATTATCAATGGTGTTCGCGTTTTGTATTTTTGAAACAATTGGATATACACCACTAGCAATT
AGCGTACTATTACTTACATTTATTCCGACTGCAGTTATGCTCAAAATTCAAGAAGGTATTGTCACGAGTTCAGTTATTGT
GATGCACCTATATTCATTGAAACAAATTACATGGCTTATTGTTGGGAATGAAATTGCTATATTAACGATAGGGATTAGCG
TGGCTCTATTAGTAAATATGTATATGCCAAGTAGTGAAAATAAGCTAAAAGAGTATCAAGAGAAAATAGAAAATAATTTT
AAAACGATTTTGTTTGAAATGGTTGTGTATTTACGAAACCGAGAAAGTAGTTGGAGCGGGGCAGAACTTATTGAAACTGA
ACAGATGCTAAATGAGGCTAGAGATTTATCATTTAAGAAACTTGAGAATGCATTTATGCGAGAAGATGACTATTACTATC
GCTATTTCAATATGCGCATGCAACAATTCGAAATTTTAGAGCGAATGATTCCGTTAGCAGCTTCTTTATCGTGGACATAT
GAACAAGCTGATATGATTGCGGATGTGGTTGAAAACATTGGAAATGCTATTAGCCCTCAGAGTACCGGAGTTATTTCTTT
AAGACAGCTTCAAGAAATGAGAGAATTATTTAGAGATATGCCATTGCCGGCTACACGTGAAGAATTTGAAATACGTGCGA
AACTTGTTCAACTTGTGTATGAAATGGAGCAATATTTACTCATTAAAAGTCGTTTTAAGGGAAAGGATAATATAAAAGAA
CTTATATAG

Upstream 100 bases:

>100_bases
GTAATATGTAAAGGTTACGTGAATAATAAGTAGAAAAGGATGACATTGTGTCATCCTTTTTTTATACTATAAATACGTTT
ATACATATAGGAGCAATGCT

Downstream 100 bases:

>100_bases
AAGGTAGGAATTGTTTATGCCGTATCTTCTCTCTTTCATATTATGTCTTTCTTTATCGCCTATTTGGCCTCTTGGTGATA
ATCCGCGTGCCGGTGATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MFKIGYRTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFAFCIFETIGYTPLAI
SVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIAILTIGISVALLVNMYMPSSENKLKEYQEKIENNF
KTILFEMVVYLRNRESSWSGAELIETEQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTY
EQADMIADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYLLIKSRFKGKDNIKE
LI

Sequences:

>Translated_322_residues
MFKIGYRTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFAFCIFETIGYTPLAI
SVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIAILTIGISVALLVNMYMPSSENKLKEYQEKIENNF
KTILFEMVVYLRNRESSWSGAELIETEQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTY
EQADMIADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYLLIKSRFKGKDNIKE
LI
>Mature_322_residues
MFKIGYRTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFAFCIFETIGYTPLAI
SVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIAILTIGISVALLVNMYMPSSENKLKEYQEKIENNF
KTILFEMVVYLRNRESSWSGAELIETEQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTY
EQADMIADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYLLIKSRFKGKDNIKE
LI

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343
- InterPro:   IPR021062 [H]

Pfam domain/function: PF06081 DUF939; PF11728 DUF939_C [H]

EC number: NA

Molecular weight: Translated: 37100; Mature: 37100

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIGYRTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACV
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
LSMVFAFCIFETIGYTPLAISVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEE
VGNEIAILTIGISVALLVNMYMPSSENKLKEYQEKIENNFKTILFEMVVYLRNRESSWSG
ECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AELIETEQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTY
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EQADMIADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVY
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EMEQYLLIKSRFKGKDNIKELI
HHHHHHHHHHHCCCCCHHHHHC
>Mature Secondary Structure
MFKIGYRTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACV
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
LSMVFAFCIFETIGYTPLAISVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEE
VGNEIAILTIGISVALLVNMYMPSSENKLKEYQEKIENNFKTILFEMVVYLRNRESSWSG
ECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AELIETEQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTY
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EQADMIADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVY
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EMEQYLLIKSRFKGKDNIKELI
HHHHHHHHHHHCCCCCHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]