Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
Click here to switch to the map view.
The map label for this gene is bioB [H]
Identifier: 49187021
GI number: 49187021
Start: 3958794
End: 3959792
Strand: Reverse
Name: bioB [H]
Synonym: BAS4023
Alternate gene names: 49187021
Gene position: 3959792-3958794 (Counterclockwise)
Preceding gene: 49187022
Following gene: 49187020
Centisome position: 75.73
GC content: 38.14
Gene sequence:
>999_bases ATGAAACAAGTACAAACAAAAAGGGATTGGAAAAAACTTGCATATGACGTAGTAGAAGAAAAAATGATTACGAAAGAGGA TGCAATAGCGATATTAGAAGCTGATGATACAGAAGTTTTAGAGATTATGAATGCTGCTTACATTATTCGCCATCATTACT TTGGTAAGAAAGTAAAATTAAATATGATTATTAATACGAAATCTGGATTATGTCCTGAAGATTGCGGATATTGTTCACAG TCGATTATTTCAGAAGCACCAATCGATAAATATGCATGGCTAACGCAGGAAAAGATTGTAGAAGGAGCACACGAAGCAAT ACGCCGTAAAGCTGGTACATATTGTATTGTAGCATCTGGTCGTCGCCCGACGGATAAAGAGGTGAATCACGTAATTGGAG CAGTTAAGGAGATTCGTGAAACGACAGATTTGAAGATTTGTTGTTGTTTAGGTTTCTTAAACGAAGATCAAGCAGGACGT TTAGCTGAAGCTGGTGTACATCGTTATAACCACAACTTAAATACACATGCGAATAATTACGAAAGCATTTGCTCCACTCA TACGTATGATGATCGTGTTGATACAGTTCAAAAAGCGAAACAAGCGGGTATTTCACCATGTTCTGGGGCAATCTTTGGAA TGGGAGAGACAATAGAAGAGCGCGCTGAAATTGCATTCGAATTACAACGTATAGATGCAGATTCAATTCCATGTAATTTC CTTGTTGCTGTAAAGGGTACGCCGCTTGAAGGACAAAAGGAGTTAACGCCAGTAGAATGTTTAAAAGTGTTGGCAATGAT GCGTTTTGTAAACCCAACAAAAGAAATTCGTATTTCAGGAGGGCGTGAAATCAATTTACGTTCTGTACAGCCAATCGGTT TATTTGCAGCAAACTCTATTTTTGTTGGAGACTACTTAACGACAGCTGGACAAGAACCGACTGCAGACTGGGGTATGATT GAAGATTTAGGATTTGAGATTGAAGAATGTGCGTTATAA
Upstream 100 bases:
>100_bases ATGCTTCGCATATATGAAAGAGACTTCACGGGAAATGAAGGGATAATGGCGACGTATCATGCTTTATTTATGCATATAAC AAAAGAGGGGAAGAGATGAA
Downstream 100 bases:
>100_bases GATAGAGGAAAAAGTAAACTTGTAAAAGAGTTTGCTTTTTTTGTAAATAAAATGTAATAAATAGTTGTGAACGCTTGATA CTAGTGGCTTTTGAGCGAAA
Product: biotin synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKQVQTKRDWKKLAYDVVEEKMITKEDAIAILEADDTEVLEIMNAAYIIRHHYFGKKVKLNMIINTKSGLCPEDCGYCSQ SIISEAPIDKYAWLTQEKIVEGAHEAIRRKAGTYCIVASGRRPTDKEVNHVIGAVKEIRETTDLKICCCLGFLNEDQAGR LAEAGVHRYNHNLNTHANNYESICSTHTYDDRVDTVQKAKQAGISPCSGAIFGMGETIEERAEIAFELQRIDADSIPCNF LVAVKGTPLEGQKELTPVECLKVLAMMRFVNPTKEIRISGGREINLRSVQPIGLFAANSIFVGDYLTTAGQEPTADWGMI EDLGFEIEECAL
Sequences:
>Translated_332_residues MKQVQTKRDWKKLAYDVVEEKMITKEDAIAILEADDTEVLEIMNAAYIIRHHYFGKKVKLNMIINTKSGLCPEDCGYCSQ SIISEAPIDKYAWLTQEKIVEGAHEAIRRKAGTYCIVASGRRPTDKEVNHVIGAVKEIRETTDLKICCCLGFLNEDQAGR LAEAGVHRYNHNLNTHANNYESICSTHTYDDRVDTVQKAKQAGISPCSGAIFGMGETIEERAEIAFELQRIDADSIPCNF LVAVKGTPLEGQKELTPVECLKVLAMMRFVNPTKEIRISGGREINLRSVQPIGLFAANSIFVGDYLTTAGQEPTADWGMI EDLGFEIEECAL >Mature_332_residues MKQVQTKRDWKKLAYDVVEEKMITKEDAIAILEADDTEVLEIMNAAYIIRHHYFGKKVKLNMIINTKSGLCPEDCGYCSQ SIISEAPIDKYAWLTQEKIVEGAHEAIRRKAGTYCIVASGRRPTDKEVNHVIGAVKEIRETTDLKICCCLGFLNEDQAGR LAEAGVHRYNHNLNTHANNYESICSTHTYDDRVDTVQKAKQAGISPCSGAIFGMGETIEERAEIAFELQRIDADSIPCNF LVAVKGTPLEGQKELTPVECLKVLAMMRFVNPTKEIRISGGREINLRSVQPIGLFAANSIFVGDYLTTAGQEPTADWGMI EDLGFEIEECAL
Specific function: Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism [H]
COG id: COG0502
COG function: function code H; Biotin synthase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. Biotin synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786992, Length=295, Percent_Identity=34.2372881355932, Blast_Score=189, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321725, Length=309, Percent_Identity=32.0388349514563, Blast_Score=159, Evalue=9e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010722 - InterPro: IPR002684 - InterPro: IPR006638 - InterPro: IPR007197 [H]
Pfam domain/function: PF06968 BATS; PF04055 Radical_SAM [H]
EC number: =2.8.1.6 [H]
Molecular weight: Translated: 36997; Mature: 36997
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVQTKRDWKKLAYDVVEEKMITKEDAIAILEADDTEVLEIMNAAYIIRHHYFGKKVKL CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEE NMIINTKSGLCPEDCGYCSQSIISEAPIDKYAWLTQEKIVEGAHEAIRRKAGTYCIVASG EEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC RRPTDKEVNHVIGAVKEIRETTDLKICCCLGFLNEDQAGRLAEAGVHRYNHNLNTHANNY CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCH ESICSTHTYDDRVDTVQKAKQAGISPCSGAIFGMGETIEERAEIAFELQRIDADSIPCNF HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE LVAVKGTPLEGQKELTPVECLKVLAMMRFVNPTKEIRISGGREINLRSVQPIGLFAANSI EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCEEEEECCE FVGDYLTTAGQEPTADWGMIEDLGFEIEECAL EECCHHHHCCCCCCCCCCCHHHHCCCHHHHCC >Mature Secondary Structure MKQVQTKRDWKKLAYDVVEEKMITKEDAIAILEADDTEVLEIMNAAYIIRHHYFGKKVKL CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEE NMIINTKSGLCPEDCGYCSQSIISEAPIDKYAWLTQEKIVEGAHEAIRRKAGTYCIVASG EEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC RRPTDKEVNHVIGAVKEIRETTDLKICCCLGFLNEDQAGRLAEAGVHRYNHNLNTHANNY CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCH ESICSTHTYDDRVDTVQKAKQAGISPCSGAIFGMGETIEERAEIAFELQRIDADSIPCNF HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE LVAVKGTPLEGQKELTPVECLKVLAMMRFVNPTKEIRISGGREINLRSVQPIGLFAANSI EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCEEEEECCE FVGDYLTTAGQEPTADWGMIEDLGFEIEECAL EECCHHHHCCCCCCCCCCCHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA